Protein Alignment Rs1 and Rm62

DIOPT Version :10

• Sequence 1: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Alignment Length: 473
• Identity: 156/473 - (32%)
• Similarity: 239/473 - (50%)
• Gaps: 43/473 - (9%)

  Fly    88 KRGGAEAVAAEQSDGSEIDLSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEKMQFADTV-- 150
            :|||        ..|...||....:...||...:|...::....|.....|.:..:.:...||
  Fly   218 RRGG--------GGGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG 274

  Fly   151 EANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPT 215
            :....|..|.:::|...:|:.|...||..||.|||...|:|:.|.:..|.|.||:|||..|:||.
  Fly   275 QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPA 339

  Fly   216 LERL-LYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQN 279
            :..: ..:||........|||.|||||..|:.||..:....:.:......||.....|...|::.
  Fly   340 IVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRG 404

  Fly   280 PDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSAT 344
            .:|||||||||||.: :..|..|.....|:|||||||||..|..|:::|::.....|||:::|||
  Fly   405 CEIVIATPGRLIDFL-SAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 468

  Fly   345 MSEQVKDLAAVSLDKPIKVFVNNNQQVA-FNLRQ------EFIRIREDKEGDREPILASLICRTF 402
            ..::||.||...|...|::.:.:.:..| .|:||      ||     .||...:.:|:.:
  Fly   469 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEF-----SKEEKLKTLLSDI----- 523

  Fly   403 HD------HCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATD 461
            :|      ..::||:||::...|...:...|||.|.:||:.:|.:|...|::|:..:.::|:|||
  Fly   524 YDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATD 588

  Fly   462 VAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSL---AGEKERKIVKDIIKNAE 523
            |||||||:.|:|.||||..|..:|.||||:|||.|:...|.|.:.   ...|:.|.:.|:::.|
  Fly   589 VAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREA- 652

  Fly   524 STIKNRIIPPEIIEKYRN 541
                |:.|.|.:....||
  Fly   653 ----NQEINPALENLARN 666

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	143/403 (35%)
Rm62	NP_524243.2	DEAD-like_helicase_N	231..669	CDD:475120	150/452 (33%)