DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and Dbp73D

DIOPT Version :9

Sequence 1:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_476833.1 Gene:Dbp73D / 39871 FlyBaseID:FBgn0004556 Length:687 Species:Drosophila melanogaster


Alignment Length:748 Identity:196/748 - (26%)
Similarity:318/748 - (42%) Gaps:195/748 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SVKEYNQDTWDDLMKYVKRKAR-TKTDDKI--------AARLQKRGGAEAVAAEQSDGSEIDLSE 109
            :|..|.:|     :|..|..|: |..:|:|        |.|.:|....|.|.....:....|:.|
  Fly     5 TVNRYTED-----LKEQKDGAQGTNNEDEILQKLLKKAAKRKRKHEAIEVVETPILEKETSDVKE 64

  Fly   110 DELKHDNLRLREK--------------------KESKKKKKK----------------AGEEDEE 138
            .|.|.:.:...||                    .:|..||||                .|....|
  Fly    65 SESKEEQVEEPEKPLEVVQEEDVPSNEFQVLGGDDSAAKKKKVQMQLPNWLAHPTIIEGGSLQPE 129

  Fly   139 DEGEKMQFADTVEANEQIT--SFYQMNLSR--PLMRAIGVLGYIYPTPIQASTIPVALLGRDICG 199
            :|....:..|.::..|:.|  :..||.:.|  |:.:      .:.|..::|...|.....||||.
  Fly   130 EEVPASEAIDQLDYLEKYTCQALKQMKIKRLFPVQK------QVIPWILEAHAKPPPFRPRDICV 188

  Fly   200 CAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAI 264
            .|.||:|||.|:.:|.:: ||.:.::.|  .|.||::|..||..|||:|..:||..|.::|.|..
  Fly   189 SAPTGSGKTLAFAIPIVQ-LLSQRVDCK--VRALVVLPVAELALQVYRVISELCSKTELEVCLLS 250

  Fly   265 GGLDVK-AQEAVLRQ-------NPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYF 321
            ....:: .||.::.|       ..|||:.|||||:||:..|..|.|.|::.|::|||||::|..|
  Fly   251 KQHKLEDEQEKLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVF 315

  Fly   322 --------------AEQM----------KEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIK 362
                          .:|:          .|:..|..|....:|||||:|:..:.|..:.|.:| :
  Fly   316 QNWLYHLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATLSQDPEKLQDLRLFQP-R 379

  Fly   363 VFVNNNQQVAFNLRQEFIRIREDKEGDREPI-------------------------------LAS 396
            :|       |..|....::...::..|.|.:                               :.:
  Fly   380 LF-------ATVLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCVTELRLKPLTVFA 437

  Fly   397 LICRTFHDHCMVFVQTKKQAHRLHILLGLL----GVRAGELHGNLTQQQRLESLKKFKEEQIDVL 457
            |:.:......:.|..:..||.||..:|.:|    ..:..||.|||:.:.|.|.|:.|...:|:.|
  Fly   438 LVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTKVSELSGNLSAKVRNERLRDFAAGKINGL 502

  Fly   458 IATDVAARGLDIVGVKTVINFVMP--ITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIK 520
            |.:|..|||:|:..|..|:::..|  |||  |||||||||||||.|.:|::..|::..:.|.|:.
  Fly   503 ICSDALARGIDVADVDVVLSYETPRHITT--YIHRVGRTARAGRKGTAVTVLTEQDMTLFKKILS 565

  Fly   521 NAESTIKNRI-IPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAKTEQQLSKTERKLLGQTNER 584
            :|...:...| :.|:|             |||:.::.::|                 |.|..:|:
  Fly   566 DANKGLGEEIHVSPDI-------------EIQHAVEYKEA-----------------LAGLRSEK 600

  Fly   585 RGWFQTKQQREAEKDRLALTTGDEDKASGGKGKGKTAGKR----------KRPEYGGDGEDGPPV 639
               .:.|.|:.|||:|:|      .||...|.:.:||..|          |..|.....:.....
  Fly   601 ---VKNKNQKMAEKNRVA------TKALIHKKQEETATVRPLTLMEKLQIKANEIVQSSKKSSET 656

  Fly   640 KDLEAKRNKKKKEEPRKKTPEQLAKERAMKEIE 672
            |:.:.|.: |.|.:|::...:.:||:  :|.||
  Fly   657 KNSKTKAD-KTKYQPKETKKQIIAKQ--LKAIE 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 136/462 (29%)
DEADc 159..364 CDD:238167 75/238 (32%)
Helicase_C 393..498 CDD:278689 41/141 (29%)
Dbp73DNP_476833.1 PRK11192 149..629 CDD:236877 151/537 (28%)
DEAD 162..370 CDD:278688 69/216 (32%)
HELICc 418..551 CDD:238034 46/134 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451708
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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