DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rs1 and CG9143

DIOPT Version :9

Sequence 1:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster


Alignment Length:865 Identity:223/865 - (25%)
Similarity:351/865 - (40%) Gaps:273/865 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SDAEVEYQPTKLRHKKVTEFEKGFE---FVSSVKEYNQDTWDDLMKYVKRKARTKTDDKIAARLQ 87
            |.|| .:|..|::...:::...|||   .:..:|:|:.    .|:|..:::..::..|: ..:|:
  Fly    25 SKAE-NWQKVKIKGHVISDDGGGFEGLIGLEVLKDYDA----SLVKSSQKRTTSRNPDR-ERKLK 83

  Fly    88 KR-----GGAEAVAAEQSDGSEIDLSEDEL--------------KHDN--LRLREK----KESKK 127
            |:     .|.|..::|.|..||   ||||:              :|..  .:||||    ||.:|
  Fly    84 KKKRKVSKGDEEESSESSSESE---SEDEVAVAARTSKKARLAERHAQKMQKLREKREKRKELRK 145

  Fly   128 KKKKAGEEDE----------------------EDEGEKMQFADTVEAN----------------- 153
            :||..|:|::                      :||.|.::..|:.:..                 
  Fly   146 QKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQESTDEEAPELVPISTGE 210

  Fly   154 -EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLG-RDICGCAATGTGKTAAYMLPTL 216
             |.::::..:.:...::||:|..|:..||.|||.|:|.|:.| :||.|.|.||:|||.|:.:|.|
  Fly   211 AEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPML 275

  Fly   217 ERLLYRPLNN----------------------------------------------KAITRV--- 232
            ..::.....|                                              :...||   
  Fly   276 AGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEEQAQRVQTP 340

  Fly   233 ---LVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLID-- 292
               |||.|||||..||........::|.|.|....|||.|..||.||||.||||:||||||.:  
  Fly   341 LYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELY 405

  Fly   293 -----HIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMK---EIINSCCK---TRQTMLFSATMS 346
                 |:..     ::.:..|::||.|||:::...|:::   :::||..:   .||..::|||::
  Fly   406 AQGNRHLGK-----IEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDEQKKHQRQNFVYSATLT 465

  Fly   347 ---------------------EQVKD------LAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIRE 384
                                 :|..|      :..:.:.:|..|.:.::||.|..|.:       
  Fly   466 LVHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSSQQTAQTLTE------- 523

  Fly   385 DKEGDREPILASLICRTFHD--HCMVFVQTKKQ-----------AHRLHILLGLLGVRAGELHGN 436
                      :.|:|...|.  |...|:|....           ..||..|.|||......||.|
  Fly   524 ----------SRLLCPIDHKDYHLYYFIQRHPGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHAN 578

  Fly   437 LTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAG 501
            :.|:|||::|::|::....:|||||||||||||..|:.||::.:|.|:|:|:||.||||||.:.|
  Fly   579 MIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHG 643

  Fly   502 ISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAKT 566
            |:|......|.|....:.|..|.|....:.|  |:|::..                 |.|:....
  Fly   644 ITVMFMEPGEVKSYVKLYKTLERTEDLPLFP--ILERFMG-----------------AVRERVNL 689

  Fly   567 EQQLSKTERKLLGQTNERRGWFQTKQQREAEKDRLALTTGDEDKASGGKGKGKTAGKRKRPEYGG 631
            .:.|.|.|.| |.:....|||.  |:..| |.|.:.....||.                    |.
  Fly   690 ARDLDKEELK-LKRVQSERGWM--KKHAE-EMDMIIDGYNDES--------------------GS 730

  Fly   632 DGEDGPPVKDLEAKRNKKKKEEPRK-----------------KTPE----QLAKERAMKEIE--K 673
            |.::.|.|  :|.:||:.:.|..|.                 |.|.    |||.......:|  |
  Fly   731 DQDEDPFV--IERRRNRLRVETVRAQLNALLAQPIFPRGFSFKYPNSEAAQLATSHTQSAVETMK 793

  Fly   674 VSLVRAKMAKLRKRPGKLGA 693
            .::...|.||..:...|..|
  Fly   794 AAIEDQKQAKKDRNKRKRNA 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 145/512 (28%)
DEADc 159..364 CDD:238167 79/297 (27%)
Helicase_C 393..498 CDD:278689 48/117 (41%)
CG9143NP_611467.1 BLVR <125..191 CDD:283923 16/65 (25%)
SrmB 201..747 CDD:223587 168/612 (27%)
P-loop_NTPase 217..465 CDD:304359 76/252 (30%)
HELICc 531..648 CDD:238034 50/116 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451536
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.