Protein Alignment Rs1 and Ddx54

DIOPT Version :10

• Sequence 1: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001178477.2
• Gene: Ddx54 / 360815
• RGDID: 1562539
• Length: 874
• Species: Rattus norvegicus
• Alignment Length: 791
• Identity: 221/791 - (27%)
• Similarity: 338/791 - (42%)
• Gaps: 169/791 - (21%)

  Fly    85 RLQKR--GGAEAVAAEQSDGS-EIDLSED------------------ELKHD---NLRLREKKES 125
            ||:||  |.::|..::..||. ||...:|                  |...|   :.|...:.::
  Rat    24 RLRKRRTGASQARDSDSEDGEFEIQAEDDARARKLGPGRALPSFPTSECVSDVEPDTREMVRAQN 88

  Fly   126 KKKKKKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPV 190
            |||||..|                         |..|.||.|:.:.|...||..|||||..||||
  Rat    89 KKKKKSGG-------------------------FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPV 128

  Fly   191 ALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQF 255
            .|.|:|:...|.||:||||.::||..|||..|.....|  |.|:|.|||||..|..:.||:|.:|
  Rat   129 ILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGA--RALILSPTRELALQTMKFTKELGKF 191

  Fly   256 TTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEY 320
            |.:...|.:||..::.|.|.|.:||||:|||||||: |:....:..|.|:|.::.|||||:.:..
  Rat   192 TGLKTALILGGDKMEDQFAALHENPDIIIATPGRLV-HVAVEMNLKLQSVEYVVFDEADRLFEMG 255

  Fly   321 FAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIRED 385
            ||||::|||.......||:|||||:.:.:.:.|...|.:|:.:.::.:.::...|:..|..:|||
  Rat   256 FAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFFLVRED 320

  Fly   386 KEGDREPILASLICRTF--HDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKK 448
               .:..:|..|:....  .|..:|||.||..|..|..||...||....::..|.|..|..:|.|
  Rat   321 ---TKTAVLLYLLQNVVRPQDQNVVFVATKHHAEYLTELLTGQGVSCAHIYSALDQTARKINLAK 382

  Fly   449 FKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERK 513
            |...:...||.||:|||||||..:..|||:..|...:.::|||||.|||||:|.:.||....|..
  Rat   383 FTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVP 447

  Fly   514 IVKDI----------------IKNAESTIKNRI---IPPEIIEKYRNKLTSLEPEIQNILDEEQA 559
            .:.|:                ..:|.:..::.:   :|..:::   ::.:||:..:|..|:.:..
  Rat   448 YLLDLHLFLGRSVTLARPHEEPSSAGAVGRDGVLGRVPQSVVD---DEDSSLQTALQASLELQGL 509

  Fly   560 ERQLAKTEQQLSKTERKLLGQTNERRGWFQTKQQ----------REAEKDRLALTTGDEDKASGG 614
            :|.....:||..::......::.:|.......:.          .|.|..||.|.  |..|
  Rat   510 QRVANNAQQQYLRSRPAPSPESIKRAKELDLAELGLHPLFSSCFEEGELQRLRLV--DSIK---- 568

  Fly   615 KGKGKTAGKRKRP---EYGGDGEDGPPVKDLEAKRNKKKK--------EEPRKKTPEQLAKERAM 668
                   ..|.|.   |.....:| |..:.:.|||.:.:|        .:.|:..|.....:|.:
  Rat   569 -------NYRTRTTIFEINASSKD-PSSQMMRAKRQRDRKAITSFHQGRQERQDGPADPVPQREL 625

  Fly   669 KEIEKVSLVRAKMAKLRKRPGKLGAATEV-----HRSGASDGKPKRR------------------ 710
            .:.|:..:|....          |..|||     .|.|.:.|..:||
  Rat   626 PQKEEEDMVETVE----------GVFTEVVGQKQPRPGPNQGAKRRRKEASQRDQEFYVPYRPKD 680

  Fly   711 ----------GGQSAFTNDLTDVSRGGALRLRSE----ANRHKKMTKIAAKKKASSVKLTNKAGK 761
                      |...||...:.    |..|.|..:    .:|.::..|...|||    :...::|:
  Rat   681 FDSERGLSVSGAGGAFEQQVA----GAVLDLMGDEAQNMSRGRQQLKWDRKKK----RFVGQSGQ 737

  Fly   762 NKFNKGKNFGG 772
            ....|.|...|
  Rat   738 EDKKKIKTESG 748

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	155/440 (35%)
Ddx54	NP_001178477.2	None