Protein Alignment Rs1 and eIF4A

DIOPT Version :9

• Sequence 1: NP_001286188.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001245907.1
• Gene: eIF4A / 33835
• FlyBaseID: FBgn0001942
• Length: 403
• Species: Drosophila melanogaster
• Alignment Length: 409
• Identity: 119/409 - (29%)
• Similarity: 210/409 - (51%)
• Gaps: 19/409 - (4%)

  Fly   135 EDEEDEGEKMQFADTVEA--NEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDI 197
            |..:|....|:....:|:  :|...:|..|||...|:|.|...|:..|:.||...|...:.|||:
  Fly     6 EIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDV 70

  Fly   198 CGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVLVPTRELGAQVYQVTKQLCQFTTIDV 260
            ...|.:||||||.:.:..|:::      :.:|  .:.|:|.|||||..|:.:|...|.::..:..
  Fly    71 IAQAQSGTGKTATFSIAILQQI------DTSIRECQALILAPTRELATQIQRVVMALGEYMKVHS 129

  Fly   261 GLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQM 325
            ...|||.:|:....:|.....:|:.||||:.|.| |........|::.:|||||.||...|.:|:
  Fly   130 HACIGGTNVREDARILESGCHVVVGTPGRVYDMI-NRKVLRTQYIKLFVLDEADEMLSRGFKDQI 193

  Fly   326 KEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIRED--KEG 388
            :::........|.:|.||||...|.:::...:..|:.:.|...:.....::|.::.::::  |.|
  Fly   194 QDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLG 258

  Fly   389 DREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQ 453
                .|..|.........::|..|:::..:|...:.:.......:||::.|:.|...:|:|:...
  Fly   259 ----TLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGS 319

  Fly   454 IDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDI 518
            ..|||.||:.|||:|:..|..|||:.:|...|:||||:||..|.||.|::::...:.:|:|:|||
  Fly   320 SRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDI 384

  Fly   519 IKNAESTIKNRIIPPEIIE 537
            .:...:||:.  :|..|.:
  Fly   385 EQFYHTTIEE--MPANIAD 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_001286188.1	PTZ00424	148..537	CDD:185609	116/394 (29%)
		DEADc	159..364	CDD:238167	65/206 (32%)
		Helicase_C	393..498	CDD:278689	33/104 (32%)
eIF4A	NP_001245907.1	PTZ00424	6..403	CDD:185609	119/409 (29%)
		DEADc	32..232	CDD:238167	65/206 (32%)
		Helicase_C	254..358	CDD:278689	32/107 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451709
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24031
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940