DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and Hel25E

DIOPT Version :9

Sequence 1:NP_001286188.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_723089.1 Gene:Hel25E / 33781 FlyBaseID:FBgn0014189 Length:424 Species:Drosophila melanogaster


Alignment Length:444 Identity:128/444 - (28%)
Similarity:235/444 - (52%) Gaps:38/444 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 SDGSEIDLSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNL 164
            :|..::...|||.:.:...: |.:|:.||..|.........|                 |....|
  Fly     2 ADNDDLLDYEDEEQTETTAV-ENQEAPKKDVKGTYVSIHSSG-----------------FRDFLL 48

  Fly   165 SRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAI 229
            ...::|||...|:.:|:.:|...||.|:||.||...|.:|.||||.::|.||::|  .|.:|.. 
  Fly    49 KPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL--EPSDNNT- 110

  Fly   230 TRVLVLVPTRELGAQVYQVTKQLCQFT----TIDVGLAIGGLDVKAQEAVLRQ-NPDIVIATPGR 289
            ..|||:..||||   .:|::|:..:|:    |:.|.:..||:.::..|..|:. .|.||:.||||
  Fly   111 CHVLVMCHTREL---AFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGR 172

  Fly   290 LIDHIKNTPSFTLDSIEVLILDEADRMLDEY-FAEQMKEIINSCCKTRQTMLFSATMSEQVKDLA 353
            ::..|:| ....|..::..:|||.|:||::. ....::||..|....:|.|:||||:|:.::.:.
  Fly   173 ILALIRN-KKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVC 236

  Fly   354 AVSLDKPIKVFVNNNQQVAFN-LRQEFIRIREDKEGDREPILASLICRTFHDHCMVFVQTKKQAH 417
            ...:..|::|:|::..::..: |:|.::.::|:::..:   |..|:.....:..::||::.::..
  Fly   237 KKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKK---LFELLDVLEFNQVVIFVKSVQRCV 298

  Fly   418 RLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPI 482
            .|..||......|..:|..:||::||...::||:.|..:|:||::..||:||..|..|.|:.||.
  Fly   299 ALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPE 363

  Fly   483 TTEHYIHRVGRTARAGRAGISVS-LAGEKERKIVKDIIKNAESTIKNRIIPPEI 535
            .::.|:|||.|..|.|..|:::: ::.|.:.||:.::....:..|..  :|.||
  Fly   364 DSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISE--LPEEI 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_001286188.1 PTZ00424 148..537 CDD:185609 118/396 (30%)
DEADc 159..364 CDD:238167 70/210 (33%)
Helicase_C 393..498 CDD:278689 34/104 (33%)
Hel25ENP_723089.1 DEADc_DDX39 40..248 CDD:350708 72/231 (31%)
SF2_C_DEAD 259..388 CDD:350174 39/131 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451354
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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