DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and CG14443

DIOPT Version :10

Sequence 1:NP_651970.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster


Alignment Length:467 Identity:102/467 - (21%)
Similarity:182/467 - (38%) Gaps:102/467 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218
            |.:.||.:...:..:::.:...||..||||||.|..:|..|::|...:..|||||..|:||.:.:
  Fly   327 EPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGIMK 391

  Fly   219 LLYRPLNNKAITR------VLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLR 277
            :    .|.:.:.:      ||:||..||....|                         .:|.:..
  Fly   392 M----HNQRGLMQHKKGPIVLILVDCREAAVMV-------------------------QREVLYY 427

  Fly   278 QNP--------------------DIVIATPGRLIDHIKNTPSFT-LDSIEVLILDEADRMLDEYF 321
            .||                    |:::|:.|||:..|.|..... |:....|:||..|||:|...
  Fly   428 TNPLELRTHCLLGNSQWQGHAECDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGL 492

  Fly   322 AEQMKEIINSCCKTR---QTMLFSATMSEQVKDLAAVSLDK--PIKVFVNNNQQVAF-NLRQ--E 378
            ...:..::   |:.|   |.::.|.:.|..:|.:|...|.:  .|:|...||..|.. |:||  |
  Fly   493 EGNICRLL---CRLRPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVE 554

  Fly   379 FIRIREDKEGDREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRL 443
            .:......|...:.:.|...........:::|:.:|....|..|:... |....:||..|.|:..
  Fly   555 VVNGLSKVERLMKELTAIYDTSDIPGKVVIYVKRQKVVEELVDLIRNC-VPCEGIHGGRTAQENQ 618

  Fly   444 ESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAG 508
            ..:..|.....::::||.:.:..||:.|::.|||:..|...:.|:.|:.||.         .|:.
  Fly   619 GIIHDFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTG---------CLSY 674

  Fly   509 EKERKIVKDIIKNAESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAKTEQQLSKT 573
            .:..:::...      |:.|..:..|:::..:.....:.|.:                   |...
  Fly   675 NRNCEVISFF------TMANYKLVTEVVDFLKICKQEIGPHL-------------------LQLA 714

  Fly   574 ERKLLGQTNERR 585
            |.|:.|....||
  Fly   715 EEKMFGPRQRRR 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_651970.1 SrmB 156..576 CDD:440279 97/454 (21%)
CG14443NP_572330.2 DEAD-like_helicase_N <310..720 CDD:475120 99/459 (22%)

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