Protein Alignment Rs1 and Ddx47

DIOPT Version :10

• Sequence 1: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001015005.2
• Gene: Ddx47 / 297685
• RGDID: 1310437
• Length: 455
• Species: Rattus norvegicus
• Alignment Length: 501
• Identity: 172/501 - (34%)
• Similarity: 263/501 - (52%)
• Gaps: 50/501 - (9%)

  Fly   132 AGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRD 196
            |.:|:.:...|.:|   |....|:..:|..:.::..|..|...||:..||.||...||:||.|||
  Rat     2 AADEEPDSPTEALQ---TAAEEEETKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRD 63

  Fly   197 ICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVG 261
            |.|.|.||:|||.|:.||.|..||..|....|    |||.|||||..|:.:..:.|.....:...
  Rat    64 IIGLAETGSGKTGAFALPILNALLETPQRLFA----LVLTPTRELAFQISEQFEALGSSIGVQCA 124

  Fly   262 LAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMK 326
            :.:||:|..:|...|.:.|.||||||||||||::||..|.|.:::.|::|||||:|:..|..::.
  Rat   125 VIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVD 189

  Fly   327 EIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRI-REDKEGDR 390
            :|:....:.|:|.||||||:::|:.|...:|..|:|..|::..|....|:|.::.| .:.|:...
  Rat   190 KILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYL 254

  Fly   391 EPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQID 455
            ..||..|...:|    |:|..|.....|..:||..||..|..|||.::|.:||.||.|||.:...
  Rat   255 VYILNELAGNSF----MIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARS 315

  Fly   456 VLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIK 520
            :|:|||||:|||||..|..|:||.:|..::.|||||||||||||:|.:::...:.:.::.:.|
  Rat   316 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI-- 378

  Fly   521 NAESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILDEEQAERQLAKTEQQLSKTERKLLGQTNERR 585
                        ..:|.|......:.:.|:..:.:.....::.|:.|          |.:..|::
  Rat   379 ------------EHLIGKKLPVFPTQDEEVMMLTERVSEAQRFARME----------LREHGEKK 421

  Fly   586 GWFQTKQQREAEKDRLALTTGDEDKASGGKG-KGKTAGKRKRPEYG 630
                 |::||        ..||:|...|..| :.|.||.:.:...|
  Rat   422 -----KRKRE--------DPGDDDDTEGAIGVRNKVAGGKMKKRKG 454

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	152/420 (36%)
Ddx47	NP_001015005.2	SrmB	23..453	CDD:440279	165/474 (35%)