DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and r3hdml

DIOPT Version :10

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001373427.1 Gene:r3hdml / 561976 ZFINID:ZDB-GENE-090313-275 Length:252 Species:Danio rerio


Alignment Length:201 Identity:55/201 - (27%)
Similarity:82/201 - (40%) Gaps:46/201 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KRNYIAG-------GYDSNHN--------AACRMATMEWDDELAYLASLNVRQCNMVHDSCHNTD 118
            :|.:|:|       .|   ||        .|..|..|.||:.||..|.....||...|...|   
Zfish    57 RRRFISGKDMTALLDY---HNRVRSQVFPPAANMEYMVWDERLAKSAEFWASQCIWEHGPHH--- 115

  Fly   119 AFKYSGQNLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGIIAGGYPSGYNGPAIGHFTVMMS 183
            ..::.||||:  ..||....   |:| .|:.|:||.|:.:       |||..:|....|:|.|:.
Zfish   116 FLQHIGQNLS--IISGRYKS---IID-LVKSWYDERHSFS-------YPSRCSGSVCTHYTQMVW 167

  Fly   184 ERNTRLGCAAARYN-----RDGWNQ-VLVACNYATT-NMIGRQIYSSCDWGAQGCGSGTNGEFGN 241
            ..:.::|||..:.:     ...|.| .|:.||||.. |.:|...|..    .:.| |.....:|.
Zfish   168 AASNKIGCAIKKCSDIFVFGSMWKQATLLVCNYAIKGNWVGEAPYKI----GRPC-SACPSSYGG 227

  Fly   242 LCSTSE 247
            .|:.::
Zfish   228 SCNKNQ 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 CAP_euk 62..211 CDD:349399 46/162 (28%)
r3hdmlNP_001373427.1 CAP_R3HDML 66..201 CDD:349409 43/153 (28%)

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