DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-20

DIOPT Version :9

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_507655.1 Gene:scl-20 / 191309 WormBaseID:WBGene00013972 Length:212 Species:Caenorhabditis elegans


Alignment Length:205 Identity:52/205 - (25%)
Similarity:72/205 - (35%) Gaps:57/205 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 VHSHNDKRNYIAGG---YDSNHNAACR-MATMEWDDELAYLASLNVRQCNMVHDSCHNTDAFKYS 123
            |..||..|:.:|.|   .|.......: |..|:||..||.:|..|...|..:.     ||: |..
 Worm    29 VDFHNSLRSQLANGDYVVDGVPKPPAKDMMKMKWDPILAGMAKNNAATCPSLF-----TDS-KML 87

  Fly   124 GQN----LAWQAYSGDLPDMGYILDNSVQMW---FDEVHNSNAGIIAGGYPSGYNGPAIGHF--- 178
            |:|    || ...||.|......   :|:.|   |.|              .|:.......|   
 Worm    88 GRNYYHRLA-NVTSGSLDKYALF---AVKKWERQFQE--------------RGWKNQEFRMFGDH 134

  Fly   179 ------TVMMSERNTRLGCAA----ARYNRDGW-NQVLVACNYATT-NMIGRQIYS---SCDWGA 228
                  |.|:......:||..    |..|..|: |:|:|.|.|.:. |:.|..||.   :|    
 Worm   135 RLLTSATQMVWATTRHVGCGVNICDAEKNLFGYRNKVVVICEYQSKGNIHGLPIYKEGPTC---- 195

  Fly   229 QGCGSGTNGE 238
            ..|.:.|..|
 Worm   196 SACPASTKCE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 SCP_euk 62..211 CDD:240180 43/172 (25%)
scl-20NP_507655.1 SCP 23..177 CDD:214553 43/171 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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