DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-18

DIOPT Version :10

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:204 Identity:47/204 - (23%)
Similarity:74/204 - (36%) Gaps:50/204 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 HNDKRNYIAGG--YDSNHN---AACRMATMEWDDEL---AY-LASLNVRQCNMVHDSCHNTDAFK 121
            ||:.|:.:|.|  ....|.   |...:....|:..|   || .|..|..|.:.:.|         
 Worm    45 HNNIRSQLAFGNFVTKRHTKRAAGSNIKKFVWNATLERSAYSFAQKNPSQHSFIPD--------- 100

  Fly   122 YSGQNL--AWQAYSGDLPDMGYILDNSVQMWFDEVHNS--NAGIIAGGYPSGYNGPAIGHFTVMM 182
             .|:||  .|....||....|.:   :...|..|....  ::.|:.    :...|..:||.|.|:
 Worm   101 -IGENLFWHWSTRPGDFNKYGPM---AALSWIKEFREKFWDSNILT----NDLFGSGVGHATQMV 157

  Fly   183 SERNTRLGCAAARY----NRDG--WNQVLVACNY-ATTNMIGRQIY------SSCDWGAQGCGSG 234
            .....::|||.:.:    .|.|  ..::.|.|:| ...|.:...||      |.|:  ::.|...
 Worm   158 WADTYQMGCAVSHFKEIHKRTGRPITKICVVCHYWPKGNYLNEPIYLEGPPCSKCE--SKKCDKR 220

  Fly   235 TNGEFGNLC 243
            |     .||
 Worm   221 T-----GLC 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 CAP_euk 62..211 CDD:349399 38/164 (23%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 38/164 (23%)

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