DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-1

DIOPT Version :10

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502502.1 Gene:scl-1 / 186053 WormBaseID:WBGene00004742 Length:207 Species:Caenorhabditis elegans


Alignment Length:202 Identity:54/202 - (26%)
Similarity:76/202 - (37%) Gaps:41/202 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 VHSHND------KRNYIAGGYDSNHNAACRMATMEWDDELAYLASLNVRQCNMVHDSCHNTDAFK 121
            |.:||.      |..|:|.|  :....|..|..|..|..:|..|......|...|     :....
 Worm    25 VDAHNKLRSAIAKSTYVAKG--TKKEPATDMRKMVVDSTVAASAQNYANTCPTGH-----SKGTG 82

  Fly   122 YSGQNLAWQAYSGDLPDMGYILDNSVQMWFDEVHN----SNAGIIAGGYPSGYNGPAIGHFTVMM 182
            | |:||.|...|.|:..:....:.:...|..|..:    ||| :....:.||     |||.|.|.
 Worm    83 Y-GENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKSNA-MDTTLFNSG-----IGHATQMA 140

  Fly   183 SERNTRLGCAAARYNRD----GWNQVLVACNYATT-NMIGRQIY------SSCDWGAQGCGSGTN 236
            ....:.:||......||    ..|::.|.|.|:.. |.:||.||      |||. |:..|.:.: 
 Worm   141 WANTSSIGCGVKNCGRDASMRNMNKIAVVCQYSPPGNTMGRPIYKEGTTCSSCS-GSTKCDTAS- 203

  Fly   237 GEFGNLC 243
                .||
 Worm   204 ----GLC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 CAP_euk 62..211 CDD:349399 41/161 (25%)
scl-1NP_502502.1 SCP 19..174 CDD:214553 42/162 (26%)

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