DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-14

DIOPT Version :10

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502532.1 Gene:scl-14 / 184246 WormBaseID:WBGene00008625 Length:208 Species:Caenorhabditis elegans


Alignment Length:207 Identity:51/207 - (24%)
Similarity:86/207 - (41%) Gaps:32/207 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GDAELIDINDDYKWVFVHSHNDKRNYIAGGYDSNHNAACRMATMEWDDELAYLASLNVRQCNMVH 111
            |.|.::::::.     :.|...|..|:|.|  :..:||..|..|:|...||..:.:...:|...|
 Worm    23 GQAAILNVHNT-----LRSRIAKGTYVARG--TVKHAASDMLKMKWLRSLATSSQIYANRCPTGH 80

  Fly   112 DSCHNTDAFKYSGQNLAWQAYSG---DLPDMGYILDNSVQMWFDEVHNSNAGIIAGGYPSGYNGP 173
            .:....      |:||.|...||   ::...|.:...:.:..|.:...|:..:....:.||    
 Worm    81 SNMIGV------GENLYWYWTSGTITNIDQFGAMASAAWEKEFQDYGWSSNTLTMSLFNSG---- 135

  Fly   174 AIGHFTVMMSERNTRLGCAAARYNRD--GWNQVLVACNYATT-NMIGRQIYSS---CDWGAQGCG 232
             :||.|.|...:...:||.......|  |.|:|.|.|:|... |.:.:.||:|   |    ..|.
 Worm   136 -VGHATQMAWAKTNLIGCGVKNCGMDTNGMNKVAVVCHYQPQGNYLNQNIYTSGTTC----SKCP 195

  Fly   233 SGTNGEFG-NLC 243
            :||:.|.. .||
 Worm   196 AGTSCEAATGLC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 CAP_euk 62..211 CDD:349399 37/153 (24%)
scl-14NP_502532.1 SCP 22..175 CDD:214553 40/169 (24%)

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