DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-26

DIOPT Version :10

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_504963.1 Gene:scl-26 / 183662 WormBaseID:WBGene00016821 Length:208 Species:Caenorhabditis elegans


Alignment Length:205 Identity:41/205 - (20%)
Similarity:72/205 - (35%) Gaps:56/205 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 YKW--------VFVHSHNDKRNYIAGGYDSNHN--AACRMATMEWDDELAYLASLNVRQCNMVH- 111
            ::|        |||  ||..||..:.|..:.||  .:..|..:.|::.|...|...:..|:.:. 
 Worm    20 HEWNETAIEGLVFV--HNKLRNDASQGLWARHNISKSTDMQKLFWNNSLVAEAKHEMYDCDQLEK 82

  Fly   112 ------DSCHNTDAFKY---SGQNLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGIIAGGYP 167
                  ::.:..|...|   .||. ...|.:.|..|.....|.:.|....:              
 Worm    83 RELTLGENIYQYDVTTYDDVDGQQ-GEAAINKDSHDALSSKDQAAQYRLRQ-------------- 132

  Fly   168 SGYNGPAIGHFTVMMSERNTRLGC---AAARYNRDG--WNQVLVACNYA-TTNMIGRQIYSSCDW 226
                        ::.|:.|: :||   :..|.:.:|  :|...:.|.|: ....|..|:|...:.
 Worm   133 ------------ILYSKSNS-IGCIYESCDRIDDEGTNYNTRFIICKYSPALKNIDDQLYEEGEE 184

  Fly   227 GAQGCGSGTN 236
            ....|.|||:
 Worm   185 ACSNCPSGTS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 CAP_euk 62..211 CDD:349399 31/165 (19%)
scl-26NP_504963.1 CAP_euk 30..168 CDD:349399 32/167 (19%)

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