DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ag5r2 and scl-8

DIOPT Version :9

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502510.1 Gene:scl-8 / 183345 WormBaseID:WBGene00008030 Length:210 Species:Caenorhabditis elegans


Alignment Length:208 Identity:59/208 - (28%)
Similarity:83/208 - (39%) Gaps:42/208 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KWVFVHSHND------KRNYIAGGYDSNHNAACRMATMEWDDELAYLASLNVRQCNMVHDSCHNT 117
            |...:::|||      |.||:|.|  :...:|..|..|:||..|...|......|:|.|.:...|
 Worm    23 KQSILNAHNDIRSRIAKGNYVAKG--NRKESATNMLKMKWDSSLEQSAQNYANGCHMQHSTNDKT 85

  Fly   118 DAFKYSGQNLAWQAYSG----DLPDMGYILDNSVQMWFDEVH----NSNAGIIAGGYPSGYNGPA 174
                 .|:||.|: :||    ||...|.|   :...|..|..    |||...:|      .....
 Worm    86 -----IGENLYWE-WSGDPFSDLDKFGKI---ATVAWDHEFEQFGWNSNKFSLA------LFNTG 135

  Fly   175 IGHFTVMMSERNTRLGCAAARYNRD----GWNQVLVACNYATT-NMIGRQIYSSCDWGA--QGCG 232
            :.|.|.:......::||......||    |..||.:.|.|... |...:.||:|   ||  ..|.
 Worm   136 VAHATQIAWAPTGKIGCGVKNCGRDARRGGLFQVAIVCQYRVRGNFFFKNIYNS---GATCSACP 197

  Fly   233 SGTNGEFG-NLCS 244
            :||:.|.. .||:
 Worm   198 AGTSCEQSTGLCA 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 SCP_euk 62..211 CDD:240180 45/166 (27%)
scl-8NP_502510.1 SCP 22..175 CDD:214553 46/168 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

Return to query results.
Submit another query.