DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-6

DIOPT Version :9

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:209 Identity:47/209 - (22%)
Similarity:74/209 - (35%) Gaps:28/209 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DAELIDINDDYKWVFVHSHNDKRNYIA-GGYDSNHN---AACRMATMEWDDELAYLASLNVRQCN 108
            |||.......:   .|..||..|:.:| |.|..|..   |...:..|.||..||..|......|.
 Worm    17 DAEFSSSTQQF---IVDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCP 78

  Fly   109 MVHDSCHNTDAFKYSGQNLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGIIAGGYPSGYNG- 172
            ....:...|      |:||.|:..|.::..:......:...|..|....       |:.:.|.. 
 Worm    79 TGFSNTQGT------GENLYWRTTSANISGLDIYGGAASVSWEQEFQKY-------GWATNYFSQ 130

  Fly   173 ----PAIGHFTVMMSERNTRLGCAAARYNRD--GWNQVLVACNYATTNMIGRQIYSSCDWGAQGC 231
                ..:|:.|.|...:...:||......:|  |.|:|.|.|:|........|:..:..:....|
 Worm   131 ELFDTGVGNGTQMAWAKTNLVGCGVKNCGKDSTGLNKVAVVCHYKPLGRYVDQMIYTAGFTCSQC 195

  Fly   232 GSGTN-GEFGNLCS 244
            .:||: .:...||:
 Worm   196 PTGTSCDQTTGLCA 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 SCP_euk 62..211 CDD:240180 37/159 (23%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 38/168 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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