DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-23

DIOPT Version :9

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_499859.3 Gene:scl-23 / 182028 WormBaseID:WBGene00015246 Length:330 Species:Caenorhabditis elegans


Alignment Length:224 Identity:59/224 - (26%)
Similarity:87/224 - (38%) Gaps:56/224 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VFVHSHNDKRNYIA-GGY---DSNHNAACRMATMEWDDELAYLASLNVRQCNMVHDSCHNTDAFK 121
            :.:..||:.|:.:| |.|   |.....|..|..::||.||...|....:|||:..::        
 Worm   124 LILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQCNLQKEN-------- 180

  Fly   122 YSGQNL-AWQAYSGD----------LPDMGYILDNSVQMWFDEVHNSNAGIIAG-------GYPS 168
             ||:.: .|....|:          |...|.:| ..:|...||:      .|||       .|.|
 Worm   181 -SGRQMNGWDEVRGENAFYFRTTDGLDVSGAVL-KGIQRMGDEI------AIAGIKNLKLSRYDS 237

  Fly   169 GYNGPAIGHFTVMMSERNTRLGCAA----ARY--NRDGWNQVLVACNYATTNMIGR-----QIYS 222
                 .|||.|.::.:...:||||.    ||.  :.||....:..|.|..|..:.:     .|||
 Worm   238 -----RIGHATQILWKETRKLGCAVQECPARQDGSLDGQKYNVAVCKYYPTGNVFKSSTPTSIYS 297

  Fly   223 SCDWGAQGCGSGTNGE-FGNLCSTSEWYD 250
            ..| .|..|..||.|: ...||..:.|.:
 Worm   298 VGD-VASACSEGTFGDPSTGLCVAATWQE 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 SCP_euk 62..211 CDD:240180 45/176 (26%)
scl-23NP_499859.3 CAP_euk 122..281 CDD:349399 45/177 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157344
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.900

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