Protein Alignment Ag5r2 and vap-1

DIOPT Version :10

• Sequence 1: NP_524689.2
• Gene: Ag5r2 / 44079
• FlyBaseID: FBgn0020508
• Length: 254
• Species: Drosophila melanogaster
• Sequence 2: NP_001024553.1
• Gene: vap-1 / 181768
• WormBaseID: WBGene00006886
• Length: 424
• Species: Caenorhabditis elegans
• Alignment Length: 271
• Identity: 60/271 - (22%)
• Similarity: 96/271 - (35%)
• Gaps: 84/271 - (30%)

  Fly    20 DYCSSDI-CNGGSHIACGHSNWWD----------SSCPGDAELIDINDDYKWVFVHSHNDKRNYI 73
            |.|:||. |...|...|.:...:.          :.||   .:.|.:|..:..|:.:||..|..:
 Worm   189 DACTSDAECTTYSDSQCKNGLCYKAPQAPVVETFTMCP---SVTDQSDQARQNFLDTHNKLRTSL 250

  Fly    74 AGGYDSNHNAACRMATMEWDDELAYLASLNVRQCNMVHDSC----------------HNTDAFKY 122
            |.|.:::..||...|.|             .:|...:..||                |:|.|.:.
 Worm   251 AKGLEADGIAAGAFAPM-------------AKQMPKLKYSCTVEANARTWAKGCLYQHSTSAQRP 302

  Fly   123 S-GQNLAWQAYSGDLPDMGYI--LDNSVQMWFDEVHNSNAG----IIAGGYPSGYNGPAIGHFTV 180
            . |:||    |...:.:|..|  .::|.:.|:.|:.:...|    :....:..|     :||:|.
 Worm   303 GLGENL----YMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRG-----VGHYTQ 358

  Fly   181 MMSERNTRLGCAAAR-----YNRDGWNQVLVACNYATT-NMIGRQIY---SSCDWGAQGCGSGTN 236
            |..|..|.:||....     |:         .|.|... |.:.:.||   |.|...|...|:.|
 Worm   359 MAWEGTTEIGCFVENCPTFTYS---------VCQYGPAGNYMNQLIYTKGSPCTADADCPGTQT- 413

  Fly   237 GEFGNLCSTSE 247
                  ||.:|
 Worm   414 ------CSVAE 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ag5r2	NP_524689.2	CAP_euk	62..211	CDD:349399	37/176 (21%)
vap-1	NP_001024553.1	SCP	31..175	CDD:214553
		SCP	234..386	CDD:214553	38/182 (21%)