DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-13

DIOPT Version :9

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_504055.1 Gene:scl-13 / 178798 WormBaseID:WBGene00019179 Length:208 Species:Caenorhabditis elegans


Alignment Length:257 Identity:59/257 - (22%)
Similarity:90/257 - (35%) Gaps:75/257 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLALLAILIVSLALAQATDYCSSDICNGGSHIACGHSNWWDSSCPGDAELIDINDDYKWVFVHS 65
            ||.||..:.|...|.||                       :.|:..|  :::|           :
 Worm     1 MKFALCLLAIFGCATAQ-----------------------FSSTAQG--QIVD-----------A 29

  Fly    66 HNDKRNYIA-GGY---DSNHNAACRMATMEWDDELAYLASLNVRQCNMVHDSCHNTDAFKYSGQN 126
            ||..|:.|| |.|   .:...:|..|..:.||:.:|..|......|...|...      .| |:|
 Worm    30 HNKLRSAIAQGSYVAAGTQEPSASNMRKIVWDETVAAAAQEYAEGCPDDHSGT------SY-GEN 87

  Fly   127 LAWQAYSGDLPD----MGYILDNSVQMWFDEVHNSNAGIIAGGYPSGYNGPAIGHFTVMMSERNT 187
            |.| ::|...|.    .|....||.:..|.:...::..:...|:.:|     |||.|.|.....:
 Worm    88 LYW-SWSSSAPSSLDKFGVAASNSWESEFQKYGWTSTFLDEAGFATG-----IGHATQMAWAETS 146

  Fly   188 RLGCAAARYNRD----GWNQVLVACNY-ATTNMIGRQIYSSCDWGAQGCGSGTNGEFGNLCS 244
            ::||......:|    ...:|.|.|.| :..||:...||.             .||..:.||
 Worm   147 KIGCGIKNCGKDANKKNMYKVAVVCQYDSAGNMMDSDIYQ-------------QGETCSACS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 SCP_euk 62..211 CDD:240180 40/161 (25%)
scl-13NP_504055.1 SCP 21..174 CDD:214553 41/178 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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