DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ag5r2 and scl-5

DIOPT Version :10

Sequence 1:NP_524689.2 Gene:Ag5r2 / 44079 FlyBaseID:FBgn0020508 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_502506.1 Gene:scl-5 / 178253 WormBaseID:WBGene00008027 Length:208 Species:Caenorhabditis elegans


Alignment Length:214 Identity:54/214 - (25%)
Similarity:83/214 - (38%) Gaps:38/214 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 SCPGDAELIDINDDYKWVFVHSHNDKRNYIAGGYDSNHNAACRMATMEWDDELAYLASLNVRQCN 108
            |..|.|.::::::.     :.|...|..|:|.|  :...||..|..|:||..:|..|.....:|.
 Worm    20 SANGQAAILNVHNT-----LRSRIAKGTYVAKG--TAKPAASDMLKMKWDATVAASAQAYANKCP 77

  Fly   109 MVHDSCHNTDAFKYSGQNLAWQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGIIAGGYPSG---- 169
            ..|......      |:||.|...|..:.::..........|..|..:.       |:.|.    
 Worm    78 TGHSGAAGL------GENLYWYWTSATITNIDQFGATGSAAWEKEFQDY-------GWSSNTLSM 129

  Fly   170 --YNGPAIGHFTVMMSERNTRLGCAAARYNRD--GWNQVLVACNYATT-NMIGRQIYSS---CDW 226
              :| ..|||.|.|...:...:||......:|  |:|:|.|.|.|... |.:.:.||:|   |  
 Worm   130 SLFN-TGIGHATQMAWAKTNLIGCGVKNCGKDTNGFNKVTVVCQYKPQGNYLNQNIYTSGTTC-- 191

  Fly   227 GAQGCGSGTNGEFG-NLCS 244
              ..|.|||:.|.. .||:
 Worm   192 --SKCPSGTSCEAATGLCA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ag5r2NP_524689.2 CAP_euk 62..211 CDD:349399 38/156 (24%)
scl-5NP_502506.1 SCP 22..175 CDD:214553 41/173 (24%)

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