DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ag5r2 and crispld1a

DIOPT Version :9

Sequence 1:	NP_524689.2	Gene:	Ag5r2 / 44079	FlyBaseID:	FBgn0020508	Length:	254	Species:	Drosophila melanogaster
Sequence 2:	XP_001920421.2	Gene:	crispld1a / 100149104	ZFINID:	ZDB-GENE-090612-1	Length:	508	Species:	Danio rerio

Alignment Length:	204	Identity:	54/204 - (26%)
Similarity:	74/204 - (36%)	Gaps:	51/204 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    66 HNDKRNYIAGGYDSNHNAACRMATMEWDDELAYLASLNVRQCNMVHDSCHNTDAFKYSGQNLA-- 128
            ||..|..:       :..|..|..|.||:||...|......|...|..   .......||||.
Zfish    74 HNKLRGQV-------YPPASNMEYMVWDNELERSAEEWAETCLWEHGP---AGLLPQIGQNLGVH 128

  Fly   129 WQAYSGDLPDMGYILDNSVQMWFDEVHNSNAGIIAGGYPSGYN--------GPAIGHFTVMMSER 185
            |..|.   |...:     ||.|:|||.:     .:..||...|        ||...|:|.::...
Zfish   129 WGRYR---PPTSH-----VQAWYDEVKD-----YSFPYPQECNPHCPFRCSGPVCTHYTQLVWAT 180

  Fly   186 NTRLGCAA-ARYNRDGWNQ-----VLVACNYATT-NMIGRQIY---SSCDWGAQGCGSGTNGEFG 240
            ::|:|||. ..||.:.|.|     |.:.|||:.. |..|...|   :||        |.....:|
Zfish   181 SSRIGCAINVCYNMNVWGQIWAKAVYLVCNYSPKGNWWGYAPYKHGTSC--------SACPPSYG 237

  Fly   241 NLCSTSEWY 249
            .:|..:..|
Zfish   238 GVCRENLCY 246

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ag5r2	NP_524689.2	SCP_euk	62..211	CDD:240180	44/160 (28%)
crispld1a	XP_001920421.2	SCP_euk	68..212	CDD:240180	44/160 (28%)
		LCCL	298..381	CDD:128866
		LCCL	401..500	CDD:281766
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170585678
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10334
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.850