DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ran and GSP2

DIOPT Version :9

Sequence 1:NP_001285111.1 Gene:Ran / 44072 FlyBaseID:FBgn0020255 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_014828.1 Gene:GSP2 / 854357 SGDID:S000005711 Length:220 Species:Saccharomyces cerevisiae


Alignment Length:213 Identity:167/213 - (78%)
Similarity:190/213 - (89%) Gaps:0/213 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AQEGQDIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDT 66
            ||...::||||.|||||||||||||||||:||||||||:||:|||||||.|:||.|.|:|:||||
Yeast     5 AQNNAEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDT 69

  Fly    67 AGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKV 131
            |||||||||||||||..|||:||||||||:|||||||||||||||||||||||||||||:|:|||
Yeast    70 AGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKV 134

  Fly   132 KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVAMPALLPPEVKMDKDWQAQ 196
            |||:|.|||||||||||||||||||||||||||||||.|:|.|||||.|||.||||::|:....|
Yeast   135 KAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMHQ 199

  Fly   197 IERDLQEAQATALPDEDE 214
            .::::.:|.|..|||||:
Yeast   200 YQQEMDQATALPLPDEDD 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanNP_001285111.1 PTZ00132 2..216 CDD:240284 167/213 (78%)
GSP2NP_014828.1 PTZ00132 5..217 CDD:240284 166/211 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343082
Domainoid 1 1.000 303 1.000 Domainoid score I216
eggNOG 1 0.900 - - E1_KOG0096
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68143
Inparanoid 1 1.050 363 1.000 Inparanoid score I378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53961
OrthoFinder 1 1.000 - - FOG0001651
OrthoInspector 1 1.000 - - otm46539
orthoMCL 1 0.900 - - OOG6_101761
Panther 1 1.100 - - O PTHR24071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1381
SonicParanoid 1 1.000 - - X1050
TreeFam 1 0.960 - -
1514.790

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