DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ran and RGD1306195

DIOPT Version :9

Sequence 1:NP_001285111.1 Gene:Ran / 44072 FlyBaseID:FBgn0020255 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001014084.1 Gene:RGD1306195 / 313163 RGDID:1306195 Length:216 Species:Rattus norvegicus


Alignment Length:216 Identity:182/216 - (84%)
Similarity:195/216 - (90%) Gaps:0/216 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQEGQDIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWD 65
            ||.||:....||.|||||||||||||||||:|||||||||||||||||||:|||:||.|:|||||
  Rat     1 MAAEGEPPVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLMFHTSRGPIKFNVWD 65

  Fly    66 TAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
            |||||||||||||||||.|.|:||||||||||||||||||||||||||||||||||||||:||||
  Rat    66 TAGQEKFGGLRDGYYIQAQGAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDVKDRK 130

  Fly   131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVAMPALLPPEVKMDKDWQA 195
            ||||||||||||||||||||||||||||||||||:|:|.||.||||||||||.||||.||.....
  Rat   131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLSRRLTGDSNLEFVAMPALAPPEVIMDPALAK 195

  Fly   196 QIERDLQEAQATALPDEDEEL 216
            :.||||:.||.|||||||::|
  Rat   196 KYERDLEVAQTTALPDEDDDL 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanNP_001285111.1 PTZ00132 2..216 CDD:240284 180/213 (85%)
RGD1306195NP_001014084.1 PTZ00132 1..216 CDD:240284 181/214 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I9201
eggNOG 1 0.900 - - E1_KOG0096
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 393 1.000 Inparanoid score I1908
OMA 1 1.010 - - QHG53961
OrthoDB 1 1.010 - - D1083175at2759
OrthoFinder 1 1.000 - - FOG0001651
OrthoInspector 1 1.000 - - otm44564
orthoMCL 1 0.900 - - OOG6_101761
Panther 1 1.100 - - O PTHR24071
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1050
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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