DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ran and spi1

DIOPT Version :9

Sequence 1:NP_001285111.1 Gene:Ran / 44072 FlyBaseID:FBgn0020255 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_596827.1 Gene:spi1 / 2540149 PomBaseID:SPBC1289.03c Length:216 Species:Schizosaccharomyces pombe


Alignment Length:214 Identity:174/214 - (81%)
Similarity:193/214 - (90%) Gaps:1/214 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAQEGQDIPTFKCVLVGDGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWD 65
            |||. |::||||.|||||||||||||||||:||||||||:||||||||||.||||.|.|.|||||
pombe     1 MAQP-QNVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWD 64

  Fly    66 TAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRK 130
            ||||||.|||||||||||||.:||||||||:||||||:|.||||||||||||||||||||:|:||
pombe    65 TAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDVKERK 129

  Fly   131 VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVAMPALLPPEVKMDKDWQA 195
            ||||:|.|||||||||||||||||||||||||||||||||:|||||||.|||.||||::|:...|
pombe   130 VKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEVQVDQQLLA 194

  Fly   196 QIERDLQEAQATALPDEDE 214
            |.::::.||.|..|||||:
pombe   195 QYQQEMNEAAAMPLPDEDD 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RanNP_001285111.1 PTZ00132 2..216 CDD:240284 173/213 (81%)
spi1NP_596827.1 PTZ00132 1..213 CDD:240284 173/212 (82%)
Ran 10..175 CDD:206643 146/164 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 300 1.000 Domainoid score I259
eggNOG 1 0.900 - - E1_KOG0096
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68143
Inparanoid 1 1.050 366 1.000 Inparanoid score I447
OMA 1 1.010 - - QHG53961
OrthoFinder 1 1.000 - - FOG0001651
OrthoInspector 1 1.000 - - oto100543
orthoMCL 1 0.900 - - OOG6_101761
Panther 1 1.100 - - LDO PTHR24071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1381
SonicParanoid 1 1.000 - - X1050
TreeFam 1 0.960 - -
1413.860

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