DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and a2m3f

DIOPT Version :10

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_068074598.2 Gene:a2m3f / 793100 ZFINID:ZDB-GENE-070705-476 Length:1457 Species:Danio rerio


Alignment Length:1674 Identity:370/1674 - (22%)
Similarity:647/1674 - (38%) Gaps:366/1674 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 LESLHSREPT-----------YFIVASRMVRPGLIYQVSVSILQAQYPITVHASIACDGVQISGD 175
            ||:...|||.           :.:....::..|...::..|:|:.|..:|:..::.        |
Zfish    28 LEAPRPREPVVTADEQISGPLFLVTFPSLIESGSGAKLCASLLKPQGSLTITITLI--------D 84

  Fly   176 SKDVKEGIPETLLMR--------------IPPTSVTGSYKLRVEGFYQNVFGGLAF--LNETRLD 224
            .|:.     ||.|.|              .|..:......:||      |..|.:|  ..|.::.
Zfish    85 DKNT-----ETQLARQTTQRKLHRCFNFQAPLVNGDSVQTVRV------VVQGQSFKMTEERKVM 138

  Fly   225 FSQRSMTIFVQTDKPLYMQGETVRFRTIPITTELKGFDNPVDVYMLDPNRHI-LKRWLSRQSNLG 288
            |.......|:|||||||..|:||.||.:.::.:|...|...::.:|:..|:| :.:|    :|:.
Zfish   139 FRSYLPLTFIQTDKPLYNPGQTVNFRVVTMSDKLVPLDQMYNLVVLEDFRNIRINQW----TNVS 199

  Fly   289 SVS----LEYKLSDQPTFGEWTIRVIAQGQQEESHFTVEEYYQTRFEVNVTMPAYFFTTDPFIYG 349
            ||:    |.:.|..:...|.:|:|.....:.....|.|::|...:|:|.|..|..:...|..:..
Zfish   200 SVNWILELSHVLIPEAQVGTYTLRAYIGDRIISQSFDVKQYVLPKFDVTVNAPQTYSVADVGLKV 264

  Fly   350 RVMANFTSGLPVRGNLTIKATIRPIGYFSNQVLNEKYRLGRSPLEQTNLYNERWRYNNPNQNPQV 414
            .....:|.|.||.|.:.:            :|..:.:...:.|...:...|:..:.||       
Zfish   265 EACGKYTFGQPVPGQVLV------------EVCRQPFTFAQDPKVTSICLNKSTKTNN------- 310

  Fly   415 QYNVPGQLPQDGADLSQDILYRNQYVVERHYQFDEEWPFWVRKPEYQDSSYEAWSGTYRKTLPYL 479
                                                                  :|....||...
Zfish   311 ------------------------------------------------------TGCASLTLSTS 321

  Fly   480 RYFNGTFDFKWPLRELELLVPNLANSEVLITATVGEKFYDEIISGYSVARVYNSSLRVVFLGDSP 544
            .:|..:|:            .||.||.| :...:.|:....::|..:...:.....:|.|: |.|
Zfish   322 SFFGTSFE------------SNLQNSFV-VNVNLTEEGTGVVMSKSTTVSITFEVGKVTFV-DLP 372

  Fly   545 QVFKPAMPFTTYLAVEYHDGSPIDPNLLRQGLMEVSGFVESRNGGRRDWPAQRL-PMSQQSDGIW 608
            :.:.........::|...:|:||....:.  |::.|           .||.:.| .::...:|..
Zfish   373 KFYNYGSTVNGKISVSDFNGNPIYSKAVY--LLDSS-----------IWPNKLLFNLTTNKNGFA 424

  Fly   609 EVKIDI----RNDLNL--DDRPQARDFLNG----VQNMRLQANFVDPRGERIQTELLLVSHYSPR 663
            :..:|.    :.||||  ...||:....|.    ..:..:|.:..||..... ::|.:|....|.
Zfish   425 KFSLDTTSFPKADLNLVASATPQSYFSSNSPYFTTDSQVVQLSQTDPDTPTF-SDLSIVKLEQPL 488

  Fly   664 NQHIKVTTSTEKPVVGEYIIFHIRTNFYLEEFNYLIMSKGVILVND--------RETITEGIKTI 720
            ......:.:.:...|||       |..|..:..|::||:|||:::.        ..|:|:|..|.
Zfish   489 KCGTTYSVTVKYLFVGE-------TGDYSADIIYMVMSRGVIVLHGFKTVQARASNTLTKGTVTF 546

  Fly   721 AVVLSSEMAPVATIVVWKINQQGQVVADSLTFPVNGISRNNFTVYINNRKARTGEKVEVAIFGEP 785
            .:.:.::|||:..|:|:.:.....||..|.:|.......|..::..:...|..||...:.:..:.
Zfish   547 DLSVLAKMAPIVQILVYSVLPSQTVVTGSASFDTEKCFSNQVSLQFSPATAVPGEGNILTVSAQA 611

  Fly   786 GSYVGLSGIDSAFYTMQAGNELTYAKIITKMSNFDEQTNGTYKHIWYSHEGNPDELVYFPASSFG 850
            ||..|||.||.:...||:|..|:...:...:   ..|:...|.   |..|...:.|...|..:..
Zfish   612 GSLCGLSAIDQSVLIMQSGGRLSAEGVFNML---PLQSLSDYP---YGAEDQQNCLNVRPRRAVP 670

  Fly   851 VD-ANRTFEYSGLIVFTDGYVPRRQDTCNRTLGFGECLSGRCYRLEKQCDGLFDCDDGTDEINCH 914
            .| |..||:..|:.:.|:  :|.|:..|   |.|.:.|..|.:.      |:|...:....::..
Zfish   671 TDQAYNTFKSVGMKIATN--LPVREPEC---LKFKDLLYYRNFH------GVFPLREVAFAVSGK 724

  Fly   915 ARNDTEL----------LNYRKYRFNRVLRHYENVWLWKDVNIGPHGRYIFNVEVPDRPAYWMVS 969
            |.....:          :..|.|        :...|:|:...:|..|.....:.|||....|...
Zfish   725 APAPLAMAEMAGTGGSSVTIRTY--------FPETWIWQLSLVGDSGSTSVPLTVPDTITTWDTE 781

  Fly   970 AFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEACRQGEQVGIRVTVFNYMITPIEAIVVLHDSP 1034
            ||.:| |.|||:...|| ....||||:.:.:|.:..:||...:..|||||::..::..|....|.
Zfish   782 AFCLS-SNGFGLAPPAL-LTSFQPFFLELTLPYSIIRGEAFELVATVFNYLLQCLKIQVTPTPSS 844

  Fly  1035 DYKFVHV-EEDGIVRSYNPRTSFGEHQFFIYLEAQGTTVVYVPV---VPQRL-GNVDVTLHVATL 1094
            :|....: ::.....|.|.|.:.   ::.:.....||..|.:..   ..|.| |:.|||  |::.
Zfish   845 NYTLTPINDQSSSTLSTNWRKTI---KWALTASVIGTVNVTISAEASPSQELCGDQDVT--VSSR 904

  Fly  1095 LGTDTITRTLHVESDGLPQYRHQSVLLDLSNRAYVLEYMHVNVTQTPEIPYQVDRYFVYGSNKAR 1159
            ...|.:||:|.|.::|:.:...:|.|  |..:..:|. ..|.:|    :|..|    :.||....
Zfish   905 GRIDIVTRSLRVLAEGVERTFTRSWL--LCPKGSILS-ESVKIT----LPTNV----IQGSASCS 958

  Fly  1160 ISVVGDVVGPIFPTMPVNASSLLSLPMESGEQNAFSFAANLYTIMYMRLINQRNKTLEKNAFYHM 1224
            :||:||::|....    |.::||.:|...||||....|.|:|.:.|:.:..|....::..|...:
Zfish   959 VSVIGDIMGRALN----NLANLLQMPSGCGEQNMIILAPNVYILRYLTVTAQLTPAIQDTATSSL 1019

  Fly  1225 NIGYQRQLSFMRPDGSFSLFRSDWNNSDSSVWLTSYCLRVFQEASFYEWENFIWIDATIIEKNMR 1289
            ..|||.:|::...|||||.|..|    .|:.|||::.:|.|..|     .:|.:||..:::....
Zfish  1020 LTGYQGELNYRHSDGSFSTFGYD----PSNTWLTAFVMRTFGLA-----RSFTYIDPNVLKGAKD 1075

  Fly  1290 WLLQHQTPQGSFFEVTWLPDRKMNRTNFDKNITLTSHVLITLATV----------------KDIS 1338
            ||:..|...|.|.:...|....| :.....|:|:|.:::.:|..:                :.:.
Zfish  1076 WLISTQGSDGCFVQQGTLYHNDM-KGGVGDNVTMTGYIVASLLEIGVPVTDPVITKALSFLRPLV 1139

  Fly  1339 GTLGSRVALATQRALAYIERNMDFLRHQAQPFDVA-ITAYALQLCNSPIAEEVFAILRRQARTIG 1402
            |.||:....|   .|||             .|.:| .|:...||.||         ||..|.:.|
Zfish  1140 GNLGNTYVTA---LLAY-------------TFSLAGETSTRAQLLNS---------LRNTAISEG 1179

  Fly  1403 DFMYWGNQEIPQPPRKLENQKWFSLPRLPYEYDSLNIETTAYALLVYVARREF------FVDPIV 1461
            ..::|....                     ..|:|.:|.:||.||..:..:..      :.:.||
Zfish  1180 TTLHWSQTT---------------------SGDTLAVEISAYVLLAVLTVQPVTTANLGYANRIV 1223

  Fly  1462 RWLNSQRLNDGGWASTQDTSAALKALVEYTVRSRLREVSSLTVEIEASSQGGKTQTLYIDDTNLA 1526
            .|:.:|:...||::|||||..||:||..|..:: .....|.||.:::|...|......:...|..
Zfish  1224 NWIVAQQNPYGGFSSTQDTVVALQALALYAAQA-FTPGGSSTVTVQSSVPAGDNFNFAVTPNNRL 1287

  Fly  1527 KLQSIEIPDAWGTIKVQAKGAGYAILQMHVQYNVDIEKFQTKPPVPAFGLHTKAIFHGRNQSHIS 1591
            ..|...:.:..||..|.|:|:..|.:|:...||:         |.|        :...|..|.::
Zfish  1288 LYQRNSLNNFPGTYNVVARGSACASVQVACFYNI---------PTP--------VMVARTLSVVA 1335

  Fly  1592 YVA--CQNW-IN---------QNESERSGMAVLDVAIPTGYWIQQQKLDTYVLS---NRVRNLRR 1641
            .|:  ||.. :|         ......:.|.::|:.:.:|:     ..||.:|.   |....::|
Zfish  1336 KVSGDCQAAPVNLMLTFTVKYTGRKPTTNMVLVDIKVLSGF-----TADTSLLGSPPNFAPLVQR 1395

  Fly  1642 ARYLERKIVFYFDYLDHEDICVNFTIE--RWYPVANMSRYLPVRIYDYY 1688
            .......::.|...:. :.:.|.|:|:  |...|.|:...: :.|||||
Zfish  1396 VDSNGDHVLVYLQEVP-KGVPVTFSIQLTRAVAVQNLKPAV-INIYDYY 1442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 YfaS <226..1575 CDD:441940 320/1411 (23%)
A2M_BRD 667..801 CDD:462235 35/141 (25%)
A2M 939..1030 CDD:459711 30/90 (33%)
TED_complement 1160..1490 CDD:462227 92/352 (26%)
A2M_recep 1605..1699 CDD:462226 20/89 (22%)
a2m3fXP_068074598.2 None

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