DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and Cd109

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:NP_694738.1 Gene:Cd109 / 235505 MGIID:2445221 Length:1442 Species:Mus musculus


Alignment Length:1665 Identity:415/1665 - (24%)
Similarity:726/1665 - (43%) Gaps:300/1665 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 YFIVASRMVRPGLIYQVSVSILQAQYP-ITVHASI------------ACDGVQISGDSKDVKEGI 183
            :.:.|..::|||....:.|.:|:...| :.|.|.:            ..:||...|..|.:    
Mouse    27 FLVTAPGIIRPGANVTIGVDLLENSPPQVLVKAQVFKIASNKSRSILEAEGVFHRGHFKTL---- 87

  Fly   184 PETLLMRIPPTSVTGSYKLRVEGFYQNVFGGLAFLNETRLDFSQRSMTIFVQTDKPLYMQGETVR 248
               :|..:|.:|....|:|.:.|..:|   .:.|.|.|||.|..:|:::.:||||..|...:.|:
Mouse    88 ---VLPALPLSSADKIYELHINGQSEN---EIVFSNRTRLTFESKSISVLIQTDKAFYKPKQEVK 146

  Fly   249 FRTIPITTELKGFDNPVDVYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQPTFGEWTIRVIAQG 313
            ||.:.:.::||.:...||:::.||..:::::|.|::.:||.||..::||..|.||:|:|:|....
Mouse   147 FRVLTLCSDLKPYRTSVDIFIKDPKSNVIQQWFSQKGDLGVVSKTFQLSSNPIFGDWSIQVQVND 211

  Fly   314 QQEESHFTVEEYYQTRFEVNVTMPAYFFTTDPFIYGRVMANFTSGLPVRGNLTIKATIRPIGYFS 378
            ||....|.|.||...:|||.|..|.|.......:.|.|:|.:|.|.||:|:|::  |..|:.::.
Mouse   212 QQYYQSFQVLEYVLPKFEVTVQTPLYCSLKSKQLNGSVIAKYTYGKPVKGSLSL--TFLPLSFWG 274

  Fly   379 NQVLNEKYRLGRSPLEQTNLYNERWRYNNPNQNPQVQYNVPGQLPQDGADLSQDILYRNQYVVER 443
            .:                             :|....:.:.|              :.|      
Mouse   275 KK-----------------------------KNITKSFEING--------------FAN------ 290

  Fly   444 HYQFDEEWPFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLRELELLVPNLANSEVL 508
             :.||.   :.::|........:...|:|....|         .|..|...:..:..:|.....:
Mouse   291 -FSFDN---YEMKKVMNLKPLTDVSEGSYENVDP---------SFPGPAEIIATVTESLTGISRM 342

  Fly   509 ITATVGEKFYDEIISGYSVARVYNSSLRVVFLGDSPQVFKPAMPFTTYLAVEYHDGSPIDPNLLR 573
            .:..|..|.:|.||.              :|  |...|.||::.||..:.|...||:.:.|..:.
Mouse   343 ASTNVFFKQHDYIIE--------------IF--DYTTVLKPSLNFTATVKVSRSDGNQLTPEEIE 391

  Fly   574 QGLMEV-----SGFVESRNGGRRDWPAQRLPMSQQSDGIWEVK---IDIRNDLNLDDRPQARDFL 630
            ..|:.|     :...||:.....|: .|.:..:...:||.:::   :.|..:|.|     ...||
Mouse   392 NDLVTVVTQRKNNHPESQRDQEMDY-IQTVNYTIPQNGIIKIEFPVMSISGELQL-----KAYFL 450

  Fly   631 NGVQNMRLQANFVDPRGERIQTELLLVSHYSPRNQHIKVTTSTEKPVVGEYIIFHIRTNFYLEEF 695
            :|..::.:.:.|..|....||.:        .|:::|||.:..:..|.|         |...::.
Mouse   451 DGTSSVTVHSMFTSPSKTYIQLK--------TRDEYIKVGSPFDLMVSG---------NRQFKDL 498

  Fly   696 NYLIMSKGVILVNDRETITEGIKTIAVVLSSEMAPVATIVVWKINQQGQVVADSLTFPVNGISRN 760
            :|:::|||.::...:::    .:|.::...:..||.|.|:.:.|.:.|:::.|.|..||..:..|
Mouse   499 SYMVISKGQLVAAGKQS----SRTFSLTPEASWAPKACIIAYYIAEDGEIINDILKIPVQLVFEN 559

  Fly   761 NFTVYINNRKARTGEKVEVAIFG-EPGSYVGLSGIDSAFYTMQAGNELTYAKIITKMSNFDEQTN 824
            ...::.:....:..:||.:.|.. :..|.||:..:|.:...|:..|.:|...::.::..:     
Mouse   560 KVKLFWSKPTVKPSDKVSLRISATQSDSLVGIVAVDKSVTLMENSNSITMETMVHELELY----- 619

  Fly   825 GTYKHIWYSHEGNPDELVYFPASSFGVDANRTFEYSGLIVFTDGYVPRRQ-----DTCNRTLGFG 884
                        |.:..:....:||.|     |:..||.|.||..:.|..     ||...:..|.
Mouse   620 ------------NTEYYLGMFMNSFAV-----FQECGLWVLTDATLIRDSIDEVYDTEEYSERFA 667

  Fly   885 ECLSGRCYRLEKQCDGLFDCDDGTDEINCHARNDTELLNYRKYRFNRVLRHYENVWLWKDVNIGP 949
            |         |.:.: |.|.:|.:...|.|.|                 :::...|:|.|..:|.
Mouse   668 E---------ENEAN-LVDFEDASSVNNVHVR-----------------KNFPETWIWLDAYMGS 705

  Fly   950 HGRYIFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEACRQGEQVGIRV 1014
            .....|.|.|||....|:.|||.:|...|||:.....|....||||:.:.:|.:..:||:..:.|
Mouse   706 KIYEEFEVTVPDSITSWVASAFVISEDLGFGLTTVPAELQAFQPFFLFLNLPYSVIRGEEFALEV 770

  Fly  1015 TVFNYMITPIEAIVVLHDSPDYKFVHVEEDGIVRSYN-----PRTSFGEHQFFIYLEAQGTTVVY 1074
            ::.||:...|:.::::.:|..:..:....|.....|.     ||.:             |.|:|:
Mouse   771 SIVNYLKDTIKVVILIEESDSFDILMTSNDTNGTIYRKTVQVPRDN-------------GVTLVF 822

  Fly  1075 VPVVPQRLGNVDVTLHVATLLGTDTITRTLHVESDGLPQYRHQSVLLDLSNRAYVLEYMHVNVTQ 1139
             |:.|..||.:.:|:..|:...:|.:|:|:.|:.:|:.:...:||||||::.....:...:..:.
Mouse   823 -PIKPTHLGEIPITVTAASPTASDAVTQTIVVKPEGIEKSYSKSVLLDLTDSNVESKQQSMRFSF 886

  Fly  1140 TPEIPYQVDRYFVYGSNKARISVVGDVVGPIFPTMPVNA-SSLLSLPMESGEQNAFSFAANLYTI 1203
            .|:.        |.||.:.:|:.:||::|     ..:|. |||:.:|...||||...||.|:|.:
Mouse   887 PPDT--------VIGSERVQITAIGDILG-----SSINGLSSLIRMPYGCGEQNMIYFAPNIYIL 938

  Fly  1204 MYMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRSDWNNSDSSVWLTSYCLRVFQEA 1268
            .|:....|....|::.|..:|..||||:|.:.|.|||||.|..  .:|..|.||:::.||.|.||
Mouse   939 DYLTKQKQLTVNLKEKALSYMRQGYQRELLYQREDGSFSAFGD--IDSSGSTWLSAFVLRCFLEA 1001

  Fly  1269 SFYEWENFIWIDATIIEKNMRWLLQHQTPQGSFFEVTWLPDRKMN---RTNFDKNITLTSHVLIT 1330
            .:|     |.||..::.:...||..|:...|.|    |.|.|.::   :......:|||::::.:
Mouse  1002 DYY-----IDIDQDVLHRTYTWLNAHKKFNGEF----WEPGRVIHSELQGGTKSPVTLTAYIVTS 1057

  Fly  1331 LATVKDISGTLGSRVALATQRALAYIERNMDFLRHQAQPFDVAITAYALQLCNSPIAEEVFAILR 1395
            :...|.....:.      .|.::.::|  .:|.|..:..:.:||.:|||....||.|||...:|.
Mouse  1058 VLGYKKYQPNID------VQDSIKFLE--FEFSRGISDNYTLAIISYALSTVGSPKAEEALNLLM 1114

  Fly  1396 RQARTIGDFMYWGNQEIPQPPRKLENQKWFSLPRLPYEYDSLNIETTAYALLVYVARREFFVDPI 1460
            :::...||..:|    :...|..  :..|  .||      |::||..|||||.:.........|:
Mouse  1115 QRSEKEGDTQFW----LSSGPAL--SGSW--QPR------SVDIEIAAYALLAHTLHHVSEGIPV 1165

  Fly  1461 VRWLNSQRLNDGGWASTQDTSAALKALVEYTVRSRLREVSSLTVEIEASSQG-GKTQTLYIDDTN 1524
            :|||..||.:.||:.|||||..|||||.|:   |.|....:..:::..:..| .::....||..|
Mouse  1166 MRWLIQQRNSLGGFVSTQDTVVALKALSEF---SALVHKENTDIQLTVTGPGIPRSIHFRIDSQN 1227

  Fly  1525 LAKLQSIEI----PDAWGTIKVQAKGAGYAILQMHVQYNV----DIEKFQTKPPVPAFGLHTKAI 1581
            |..|...|:    |.   |:.|.|.|:|:||.|::|.|||    ..::.::......|.|  ..|
Mouse  1228 LFLLHQEELHALDPI---TVNVSAHGSGFAICQLNVDYNVKGSGSSKRRRSTENQEVFDL--DVI 1287

  Fly  1582 FHGRNQ-SHISYVACQNWINQNESERSGMAVLDVAIPTGYWIQQQKLDTYVLSNRVRNLRRARYL 1645
            .:..:. ||::...|.:.:.   |||:||.:::|.:.:|:   ....|:..||   ..|::..|.
Mouse  1288 VNNEDDISHLNLNVCTSHLG---SERTGMVLMEVNLLSGF---SASSDSIPLS---ETLKKVEYD 1343

  Fly  1646 ERKIVFYFDYLDHEDICVNFTIERWYPVANMSRYLPVRIYDYYAPERFNESIFDALPTYLLNI-C 1709
            ..|:..|.|.::....|||....|.|.|:|: |...|.:.|||.|.|      .|:.:|...: .
Mouse  1344 NGKLNLYLDSVNESQFCVNIPTVRDYKVSNI-RDGSVSVMDYYEPRR------QAVRSYNTQVKL 1401

  Fly  1710 EVCGSSQCPYCSIYNMGWRASMSMS---LLFFSVFIYLLR 1746
            ..|..|....|..:..|...|:..|   |:|.||.:|.::
Mouse  1402 SSCYLSPDTNCKSHTDGATDSLRRSSSLLVFCSVLLYFVQ 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 35/99 (35%)
A2M_N_2 669..799 CDD:285005 27/130 (21%)
LDLa 886..913 CDD:238060 4/26 (15%)
A2M 940..1030 CDD:278630 29/89 (33%)
ISOPREN_C2_like 1177..1490 CDD:298658 103/316 (33%)
A2M_comp 1226..1492 CDD:284982 86/268 (32%)
A2M_recep 1607..1695 CDD:284981 26/87 (30%)
Cd109NP_694738.1 YfaS <122..>1002 CDD:225248 254/1064 (24%)
A2M_N 129..220 CDD:280081 31/90 (34%)
A2M_N_2 475..598 CDD:285005 30/135 (22%)
Bait region (approximate). /evidence=ECO:0000250 595..704 29/157 (18%)
A2M 695..782 CDD:278630 29/86 (34%)
A2M_2 909..1195 CDD:239227 103/318 (32%)
A2M_comp 961..1197 CDD:284982 86/271 (32%)
A2M_recep 1311..1395 CDD:284981 27/96 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8874
eggNOG 1 0.900 - - E1_COG2373
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11412
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.