DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and LOC108647609

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_031758762.1 Gene:LOC108647609 / 108647609 -ID:- Length:1389 Species:Xenopus tropicalis


Alignment Length:1636 Identity:376/1636 - (22%)
Similarity:616/1636 - (37%) Gaps:357/1636 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 TYFIVASRMVRPGLIYQVSVSILQAQY-PITVHASIACDGVQ-ISGDSKDVKEGIPETLLMRIPP 193
            :|:|.|..:|..|:...:||....:.| .|.|.|.|....|. :.......|:.|.   :|.||.
 Frog    27 SYYISAPNIVSSGINTTLSVHWFGSSYSEINVTAGILHQDVTVVQATQVFQKDSIG---IMSIPA 88

  Fly   194 TSVTGS-YKLRVEGFYQNVFGGLAFLNETRLDFSQRSMTIFVQTDKPLYMQGETVRFRTIPITTE 257
            |.:..| |.|.|.|...|   .|.|.|...|...|.....|::|||..|...|||:.|.|.:.|:
 Frog    89 TPLDSSNYFLFVNGSAGN---ELIFSNNFGLTIKQIQTKTFIETDKKNYRPQETVKIRIITVYTD 150

  Fly   258 LKGFDNPVDVYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQPTFGEWTIRVIAQGQQEESHFTV 322
            |..:..|:::|:.|.:..|:|:.|::.:.||..|.|..|..:...|..:|.....|.:......|
 Frog   151 LTPYKGPINIYIRDSSYDIIKQILNQNTELGVFSTEVLLPAKSALGSLSISAGPNGYESYESIVV 215

  Fly   323 EEYYQTRFEVNVTMPAYFF--TTDPFIYGRVMANFTSGLPVRGNLTIKATIRPIGYFSNQVLNEK 385
            .:.....|:|.:..|:|::  :...|: |:|.||:::|.||:|.:|:.             ||  
 Frog   216 VQNEPPDFDVTIVAPSYYYKQSKQDFV-GKVFANYSNGRPVKGTVTLS-------------LN-- 264

  Fly   386 YRLGRSPLEQTNLYNERWRYNNPNQNPQVQYNVPGQLPQDGADLSQDILYRNQYVVERHYQFDEE 450
                   .:..|:|               .|:   ..|:|..|:::  ::.....|...:.:.|.
 Frog   265 -------FDTYNIY---------------YYD---SYPEDLTDVNK--IFEIYGSVNFSFSYSEA 302

  Fly   451 W--PFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLRELELLVPNLANSEVLITATV 513
            :  |||.|                                                  :::||:|
 Frog   303 FKCPFWQR--------------------------------------------------LILTASV 317

  Fly   514 GEKFYDEIISGYSVARVYNSSLRVVFLGDSPQVFKPAMPFTTYLAVEYHDGSPIDPNLLRQGLME 578
            .|:...:.::.....:...|..|:..:|.....| |....|..:.::..|.              
 Frog   318 TEEKTGKTVTASWYIQRATSQYRIFVVGQLDYSF-PNQAITAKIQIQRSDD-------------- 367

  Fly   579 VSGFVESRNGGRRDWPAQRLPMSQQSDGIWEVKIDIRNDLNLDDRPQARDF---LNGVQNMRLQA 640
                               ||::|:.... .|.|...|.|     |..|.:   .:|:.|  :|.
 Frog   368 -------------------LPLTQEEMNT-NVLITFGNYL-----PITRTYSISASGILN--IQI 405

  Fly   641 NFVDPRGERIQTELLLVSHYSPRNQH--IKVTTSTEKPVVGEYIIFHIRTNFYLEEFNYLIMSKG 703
            .|.|               ||..:.|  :...|:|.|....::.:|...|.::    |..:..||
 Frog   406 PFYD---------------YSFHSSHSYVLYMTATYKDSTHQWTVFTPDTWYW----NPAVNIKG 451

  Fly   704 VILVNDRETITEGIK-TIAVVLSSEMAPVATIVVWKINQQGQVVAD--------SLTFPVNGISR 759
                 ....:..||. ||:|    ...|....|.:.::..|.:||.        :||...:.:..
 Frog   452 -----PDTPVQTGIPFTISV----GTVPEVQYVYYVVSGGGVIVAAGKTSNSSFTLTAETSWLPS 507

  Fly   760 NNFTVYINNRKARTGEKV--EVAIFGEPGSYVGLS-----GIDSAFYTMQAGN--------ELTY 809
            ...|.|..|...|.|..:  ...||...|:.|.||     ...|.:.::...|        .|..
 Frog   508 VQVTAYFINPDERFGSDIGFNTKIFHITGNKVALSWSKSKAKPSEYVSLTISNITKTPAIVGLKV 572

  Fly   810 AKIITKMSNFDEQTNGTYKHIWYSHEGNPDELVYFPASSFGVDANRTFEYSGLIVFTDGYVPRRQ 874
            |.|..|:|.   .||.....:...:.||.    |.|.|    |.|....||              
 Frog   573 ADINDKLSG---NTNSLAAKVENIYSGNS----YSPYS----DGNIGDPYS-------------- 612

  Fly   875 DTCNRTLGFGECLSGRCYRLEKQCDGLFDCDDGTDEINCHARNDTELLNYRKYRFNRVLRHYENV 939
                             |.|:     |...|...|.||       :.:|.|..        ....
 Frog   613 -----------------YGLQ-----LHSNDPNNDPIN-------QPVNLRPL--------IPET 640

  Fly   940 WLWKDVNIGPHGRYIFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEAC 1004
            |:|.:.:|.........|.:|.:...|:.|||.:|...|.|:..:..|....||..:.:..|...
 Frog   641 WIWLETHISSGVNSSLQVTLPHKVMTWVASAFVISEGLGLGVSEQYPELEVFQPLLLTLNAPRTV 705

  Fly  1005 RQGEQVGIRVTVFNYMITPIEAIVVLHDSPDYKFVHVEEDGIVRSYNPRTSFGEHQFFIYLEAQG 1069
            .:||...::||:..|:.|..:..|:|..|..::.       |:...|..:..|:...||  ::.|
 Frog   706 IRGENFILKVTLEAYIATDFQVTVMLEPSSSFEI-------IIPDNNTNSVPGQRSVFI--QSNG 761

  Fly  1070 TTVVYVPVVPQRLGNVDVTLHVATLLGTDTITRTLHVESDGLPQYRHQSVLLDLSNRAYVLEYMH 1134
            :..|..|:.|::||.:.:|:....|..:|:.|:|:.|:::|:..:...||:|             
 Frog   762 SKEVLFPINPKKLGEMSLTVQANALGFSDSATQTVLVKAEGIQHFYSSSVIL------------- 813

  Fly  1135 VNVTQTPEIPYQVDRYFVYGSNKARISVVGDVVGPIFPTMPVNASSLLSLPMESGEQNAFSFAAN 1199
             |.|...::.:......|..:.:|.:|:.|:.:.|....:    .||:.||...||||...||..
 Frog   814 -NGTDGKKLSFTFPVDVVVDTKQASLSITGNFLAPSIKGL----ESLIQLPTGCGEQNMIHFAPV 873

  Fly  1200 LYTIMYMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRSDWNNSDSSVWLTSYCLRV 1264
            :|.:.|:....|..:.....|...|..|||.:|::....||||.|.|  .:..:|.||:::.||.
 Frog   874 IYILQYLIASKQITEDFRTKAIRFMEKGYQTELNYQTYYGSFSAFGS--TDFPASTWLSAFVLRC 936

  Fly  1265 FQEASFYEWENFIWIDATIIEKNMRWLLQHQTPQGSFFEVTWLPDRKMNRTNFDKNITLTSHVLI 1329
            ..:|     ..||.|...::.:..:||..:...:...|:.:  ......|.....|..:..:..|
 Frog   937 LLQA-----RQFISISEDVLSRTKKWLFFNLNEETGIFQES--EQILKTRLQVGSNGVIAHNAYI 994

  Fly  1330 TLATVKDISGTLGSRVALATQRALAYIERNMDFLRHQAQPFDVAITAYALQLCNSPIAEEVFAIL 1394
            .:|.::|.|   ...||....:.:.|:|...:  ......:.::|.||||.:.||..|......|
 Frog   995 LIALLEDES---NKNVAYRMNKTIQYLENKTE--EGITSNYTLSIVAYALSVANSSKAAAALTQL 1054

  Fly  1395 RRQARTIGDFMYWGNQEIPQPPRKLENQKWFSLPRLPYEYDSLNIETTAYALLVYVARREFFVD- 1458
            ..:|.:.|...||.:...|       :..|..|        |.:|||.|||||.:..:...... 
 Frog  1055 NSRANSTGLQRYWSSGIDP-------SNDWQPL--------SADIETAAYALLSHCQQNRIAEGV 1104

  Fly  1459 PIVRWLNSQRLNDGGWASTQDTSAALKALVEYTVRSRLREVSSLTVEIEASSQGGKTQTLYIDDT 1523
            ||:.||:..|.:.||::|||||..||:||.::.........:||||.: ..|......|..|.:.
 Frog  1105 PIMNWLSQHRNHLGGYSSTQDTIMALQALTKFMTLVPTSNNTSLTVSV-TDSGSIVPNTFNITNE 1168

  Fly  1524 NLAKLQSIEI----PDAWGTIKVQAKGAGYAILQMHVQYN-----VDIEKFQTKPPVPAFGLHTK 1579
            ||..:||.:|    |   ..:.|.|.|.|.|:||::|.||     |..|.|:....|.....|.:
 Frog  1169 NLLVVQSQQIYALEP---LELVVSAAGEGAALLQLNVVYNSKGEAVPSEVFKLSATVDDSDSHNR 1230

  Fly  1580 AIFHGRNQSHISYVACQNWINQNESERSGMAVLDVAIPTGYWIQQQKLDTYVLSNRVRNLRRARY 1644
                      ||...|.::  |...:..||.:.:|.:.:|:     |||. |..|....|:....
 Frog  1231 ----------ISVNVCSSY--QGPEKEPGMILWEVDMLSGF-----KLDP-VGINLNDPLKLVET 1277

  Fly  1645 LERKIVFYFDYLDHEDICVNFTIERWYPVANMSRYLPVRIYDYYAPERFNESIFDALPTYLLNIC 1709
            .:.|:..|||.::..:.||...:.|...|......| :.|.|||.||.....|:::.......:|
 Frog  1278 KDEKVFLYFDSMNAIENCVAVPMVRTSMVVGSQPAL-ITILDYYNPEIRTTRIYNSDKLSKATVC 1341

  Fly  1710 EVCGSSQCPYC 1720
            |.||.: |..|
 Frog  1342 EFCGLN-CNNC 1351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 28/99 (28%)
A2M_N_2 669..799 CDD:285005 32/145 (22%)
LDLa 886..913 CDD:238060 6/26 (23%)
A2M 940..1030 CDD:278630 23/89 (26%)
ISOPREN_C2_like 1177..1490 CDD:298658 88/313 (28%)
A2M_comp 1226..1492 CDD:284982 73/266 (27%)
A2M_recep 1607..1695 CDD:284981 25/87 (29%)
LOC108647609XP_031758762.1 YfaS 54..1112 CDD:225248 292/1344 (22%)
ISOPREN_C2_like 848..1136 CDD:415487 88/320 (28%)
A2M_recep 1247..1330 CDD:400149 25/89 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.