DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and LOC103909927

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_009296557.2 Gene:LOC103909927 / 103909927 -ID:- Length:1453 Species:Danio rerio


Alignment Length:1682 Identity:367/1682 - (21%)
Similarity:634/1682 - (37%) Gaps:385/1682 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PTYFIVASRMVRPGLIYQVSVSILQAQYPITVHASIACDGVQISGDSKDVKEGIPETLLMR---- 190
            |.:.:....::..|...::..|:|:.|..:|:..::.        |.|:.     ||.|.|    
Zfish    45 PLFLVTFPSLIESGSGAKLCASLLKPQGSLTITITLV--------DDKNT-----ETQLARQTTQ 96

  Fly   191 ----------IPPTSVTGSYKLRVEGFYQNVFGGLAF--LNETRLDFSQRSMTIFVQTDKPLYMQ 243
                      .|..:......:||      |..|.:|  ..|.::.|.......|:|||||||..
Zfish    97 RKLHRCFNFQAPLVNGDSVQTVRV------VVQGQSFKMTEERKVMFRSYLPLTFIQTDKPLYNP 155

  Fly   244 GETVRFRTIPITTELKGFDNPVDVYMLDPNRHI-LKRWLSRQSNLGSVS----LEYKLSDQPTFG 303
            |:||.||.:.::.:|...|...::.:|:..|:| :.:|    :|:.||:    |.:.|..:...|
Zfish   156 GQTVNFRVVTMSDKLVPLDQMYNLVVLEDFRNIRINQW----TNVSSVNWILELSHVLIPEAQVG 216

  Fly   304 EWTIRVIAQGQQEESHFTVEEYYQTRFEVNVTMPAYFFTTDPFIYGRVMANFTSGLPVRGNLTIK 368
            .:|:|.....:.....|.|::|...:|:|.|..|..:...|..:.......:|.|.||.|.:.::
Zfish   217 MYTLRAYIGDRIISQSFDVKQYVLPKFDVTVNAPQTYSVADVGLKVEACGKYTFGQPVPGQVLVQ 281

  Fly   369 ATIRPIGYFSNQVLNEKYRLGRSPLEQTNLYNERWRYNNPNQNPQVQYNVPGQLPQDGADLSQDI 433
            ...:|:.|.            :.|...:...|:..:.||                          
Zfish   282 VCRQPLTYV------------QDPKVTSICLNKSTKTNN-------------------------- 308

  Fly   434 LYRNQYVVERHYQFDEEWPFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLRELELL 498
                                               :|....||....:|..:|:           
Zfish   309 -----------------------------------TGCASLTLSTSSFFGTSFE----------- 327

  Fly   499 VPNLANSEVLITATVGEKFYDEIISGYSVARVYNSSLRVVFLGDSPQVFKPAMPFTTYLAVEYHD 563
             .||.||.| :...:.|:....::|..:...:.....:|.|: |.|:.:.........::|...:
Zfish   328 -SNLQNSFV-VNVNLTEEGTGVVMSKSTTVSITFEVGKVTFV-DLPKFYNYGSTLNGKISVSDFN 389

  Fly   564 GSPIDPNLLRQGLMEVSGFVESRNGGRRDWPAQRL-PMSQQSDGIWEVKIDI----RNDLNL--D 621
            |:||:...:.  :::.|           .||.:.| .::...:|:....:|.    :.||||  .
Zfish   390 GNPINSKAVY--VLDSS-----------TWPNKLLFNLTTNKNGLAMFSLDTTAFPQADLNLVAS 441

  Fly   622 DRPQARDFLNG---VQNMRLQANFVDPRGERIQ-TELLLVSHYSPRNQHIKVTTSTEKPVVGEYI 682
            ..||:....|.   ..:.||...|.....:... ::|.:|:...|.........:.:...|||  
Zfish   442 ATPQSYFSYNSPYFTTDTRLVQLFQTAAPDNPSFSDLSIVTLEQPLKCGSTYAVTVKYSFVGE-- 504

  Fly   683 IFHIRTNFYLEEFNYLIMSKGVILVND--------RETITEGIKTIAVVLSSEMAPVATIVVWKI 739
                 |..|..:..|::||:|||:::.        .:|||.|..:..:.:.:.|||:..|:.:.:
Zfish   505 -----TGDYSADIIYMVMSRGVIILHGFKTVQALAFDTITSGTVSFDLSILANMAPMVQILAFCV 564

  Fly   740 NQQGQVVADSLTFPVNGISRNNFTVYINNRKARTGEKVEVAIFGEPGSYVGLSGIDSAFYTMQAG 804
            .....|||.|.:|.......|..::..:...|..||...:.:..:.||..|||.||.:...:|:|
Zfish   565 LPSQTVVAGSASFDTEKCFSNQVSLQFSPASAVPGEGSVLTVSAQAGSLCGLSAIDQSVLILQSG 629

  Fly   805 NELTYAKI--ITKMSNFDEQTNGTYKHIWYSHEGNPDELVYFPASSFGVD-ANRTFEYSGLIVFT 866
            ..||...:  :..:.:..:...|.        |...|.|...|..:...| |..||:..|:.:.|
Zfish   630 GRLTAEAVFGLLPVQSLYDYPPGV--------EDQQDCLQVRPRRAVPTDQAYNTFKGVGIKMAT 686

  Fly   867 DGYVPRRQDTCNRTLGFGECLSGRCYRLEKQCDG--LFDCDD------GTDEINCHARNDTELLN 923
            :  :|.|:.         |||:.|.....:...|  ||..|.      ...||..........:.
Zfish   687 N--LPVREP---------ECLTYRRLNFYRNFRGPMLFAMDKVLAAPAAVSEIAGSPSGSPVDVT 740

  Fly   924 YRKYRFNRVLRHYENVWLWKDVNIGPHGRYIFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEY 988
            .|.:        :...|:|:...:|..|.....:.|||....|...||.:| |.|||:...|| .
Zfish   741 IRTF--------FPETWIWQLTPVGDSGSTSVPLTVPDTITTWKTEAFCLS-SNGFGLAPPAL-L 795

  Fly   989 VGVQPFFINVEMPEACRQGEQVGIRVTVFNYMITPIEAIVVLHDSPDYKFVHVEEDGIVRSYNPR 1053
            ...||||:.:.:|.:..:||...::.|||||:...|:..|....|.::....:::.......|.|
Zfish   796 TAFQPFFLELTLPYSIIRGEVFELKATVFNYLSQCIKVQVTPTPSSNFTLNSLDQSSSTLVANGR 860

  Fly  1054 TSF---------GEHQFFIYLEAQ------GTTVVYVPVVPQRLGNVDVTLHVATLLGTDTITRT 1103
            .:|         |.....|..:|.      |..||   .||.| |.:|:            :||:
Zfish   861 KTFKWALTASVIGTVNVTISAQANPSQELCGNRVV---TVPSR-GRIDI------------VTRS 909

  Fly  1104 LHVESDGLPQYRHQSVLL-----DLSNRAYVLEYMHVNVTQTPEIPYQVDRYFVYGSNKARISVV 1163
            |.|.::|:.:...:|.||     .||..|.:            ..|..|    :.||.:..:||:
Zfish   910 LLVLAEGVKRTFTRSWLLCPKGSMLSEDARI------------TFPKNV----IQGSARCSVSVI 958

  Fly  1164 GDVVGPIFPTMPVNASSLLSLPMESGEQNAFSFAANLYTIMYMRLINQRNKTLEKNAFYHMNIGY 1228
            ||::|....    |.::||.:|...||||......|:|.:.|:::..|....::..|..::..||
Zfish   959 GDIMGRALK----NLANLLQMPYGCGEQNMIILGPNIYILRYLKVTAQLTPAIQDTAMTYLQSGY 1019

  Fly  1229 QRQLSFMRPDGSFSLFRSDWNNSDSSVWLTSYCLRVFQEASFYEWENFIWIDATIIEKNMRWLLQ 1293
            |.||::...|||||.|..|    :|:.|||::.:|.|..|     .:|.:||..:::....||:.
Zfish  1020 QGQLNYRHSDGSFSTFGYD----ESNTWLTAFVMRTFGLA-----RSFTYIDPNVLQSAKDWLIS 1075

  Fly  1294 HQTPQGSFFEVTWLPDRKMNRTNFDKNITLTSHVLITLATV----------------KDISGTLG 1342
            .|...|.|.:...|....| |.....|:|:|.:::..|..:                :.:.|.||
Zfish  1076 KQASNGCFVQQGTLYHNDM-RGGVGDNVTMTGYIVAALLEIGVPVTDPVITKALSFLRPLVGNLG 1139

  Fly  1343 SRVALATQRALAYIERNMDFLRHQAQPFDVA-ITAYALQLCNSPIAEEVFAILRRQARTIGDFMY 1406
            :....|   .|||             .|.:| .|:...||.||         ||..|.:.|..::
Zfish  1140 NTYVTA---LLAY-------------TFSLAGETSTRAQLLNS---------LRNTAISEGTTLH 1179

  Fly  1407 WGNQEIPQPPRKLENQKWFSLPRLPYEYDSLNIETTAYALLVYVARREF------FVDPIVRWLN 1465
            |....                     ..|:|.:|.:||.||..:..:..      :.:.||.||.
Zfish  1180 WSQTT---------------------SGDTLAVEISAYVLLAVLTVQPVTTANLGYANRIVNWLV 1223

  Fly  1466 SQRLNDGGWASTQDTSAALKALVEYT--VRSRLREVSSLTVEIEASSQGGKTQTLYIDDTNLAKL 1528
            :|:...||::|||||..||:|:..|.  |.|   ...|.||.:::|...|......:...|....
Zfish  1224 AQQNPYGGFSSTQDTVVALQAMALYASLVFS---SGGSSTVTVQSSVPAGDVYNFAVTPNNRLLY 1285

  Fly  1529 QSIEIPDAWGTIKVQAKGAGYAILQMHVQYNVDIEKFQTKPPVPAFGLHTKAIFHGRNQSH---- 1589
            |...:.:..||..|.|.|:....:|:...||:      ..|.|.|..|...|...|..:..    
Zfish  1286 QESPLNNFPGTYSVVASGSTCVSVQVACFYNI------PTPVVVAKTLSVVAKVTGNCKGSPVNL 1344

  Fly  1590 -----ISYVACQNWINQNESERSGMAVLDVAIPTGYWIQQQKLDTYVLS---NRVRNLRRARYLE 1646
                 :.|...:...|        |.::|:.:.:|:     ..||.:|.   |....::|.....
Zfish  1345 MLTFTVKYTGPKPTTN--------MLLVDIKVLSGF-----TADTSLLGSPPNFSPLVQRVDTEG 1396

  Fly  1647 RKIVFYFDYLDHEDICVNFTIERWYPVANMSRYLP--VRIYDYYAPERFNESIFDAL 1701
            .:::.|...:. :.:.|.::|:....|| :....|  :.:||||......|:.:.::
Zfish  1397 DRVLVYLQEVP-KGVPVTYSIQLTQTVA-VKNLKPAVINVYDYYQRSESFETTYTSV 1451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 31/104 (30%)
A2M_N_2 669..799 CDD:285005 35/137 (26%)
LDLa 886..913 CDD:238060 9/34 (26%)
A2M 940..1030 CDD:278630 31/89 (35%)
ISOPREN_C2_like 1177..1490 CDD:298658 88/335 (26%)
A2M_comp 1226..1492 CDD:284982 76/290 (26%)
A2M_recep 1607..1695 CDD:284981 18/92 (20%)
LOC103909927XP_009296557.2 A2M_N 144..235 CDD:307790 28/94 (30%)
A2M_N_2 478..626 CDD:311575 38/154 (25%)
A2M 748..836 CDD:306673 30/89 (34%)
A2M_2 965..1248 CDD:239227 88/342 (26%)
A2M_recep 1359..1448 CDD:311553 20/103 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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