DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and LOC100489060

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_002938549.2 Gene:LOC100489060 / 100489060 -ID:- Length:1482 Species:Xenopus tropicalis


Alignment Length:1652 Identity:374/1652 - (22%)
Similarity:624/1652 - (37%) Gaps:435/1652 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 LRVEGFYQNVFGGLAFLNETRLDFSQRSMTIFVQTDKPLYMQGETVRFRTIPITTELKGFDNPVD 266
            |.|:|      ..|.|.::.::........:|:|||||:|..|:.|:||...:....    :||.
 Frog   100 LDVQG------DALHFKSQRKILIKPLQNPVFIQTDKPIYKPGQKVQFRIASLDENF----HPVS 154

  Fly   267 -----VYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQPTFGEWTIRVIAQGQQEESH-FTVEEY 325
                 ||:.||..:.:.:||:.:...|.....::||.:||.|.:.:.|..:.....:| |:||||
 Frog   155 EKFPAVYITDPQGNRISQWLNVELKKGLTQESFQLSSEPTLGIYKLTVGREKSAPVTHSFSVEEY 219

  Fly   326 YQTRFEVNVTMPAYFFTTDPFIYGRVMANFTSGLPVRGNLTIKATIRPIGYFSNQVLNEKYRLGR 390
            ...::||.|.:|......|..|...|...:|.|.||.|.:.::..         :..:::|.|.:
 Frog   220 VLPKYEVQVKLPPVVGIMDKGIKVTVCGRYTYGKPVLGRIKVRVC---------RKFSDRYNLCK 275

  Fly   391 SPLEQTNLYNERWRYNNPNQNPQVQYNVPGQLPQDGADLSQDILYR-------NQYVVERHYQFD 448
            .                               .:||  :.::|.:|       ::.|..|.:|  
 Frog   276 G-------------------------------EEDG--VCEEINHRAGPNGCFSEVVSTRMFQ-- 305

  Fly   449 EEWPFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLRELELLVPNLANSEVLITATV 513
                  :|:..|:|.                            :|....::.:  .:.|.:||.|
 Frog   306 ------MRRSGYEDK----------------------------IRASATIIED--GTGVELTAAV 334

  Fly   514 GEKFYDEIISGYSVARVYNSSLRVVFLGDSPQVFKPAMPFTTYLAVEYHDGSPIDPNLLRQGLME 578
            ..:...      ::|:|   |.|                   :|...|..|.|:...|       
 Frog   335 SSEIKK------TLAKV---SFR-------------------HLDSHYRKGLPLFGQL------- 364

  Fly   579 VSGFVESRNGGRRDWPAQRLPMSQQS-----------------DGIWEVKIDIRNDLNLDDRPQA 626
               |:|..:|.         ||:.::                 ||..|..||..|          
 Frog   365 ---FLEDASGN---------PMANETVVIFVGYGTNFTYTTGQDGTAEFLIDTSN---------- 407

  Fly   627 RDFLNGVQNMRLQANFVDPRGER-IQTELLLVSH----------YSPRNQHIKVTTSTEKPVV-- 678
                  ||...||.......||. .|...:.||:          ||....::|:     :|:.  
 Frog   408 ------VQKSSLQIRARYKEGESCYQYRWVSVSYQGDERSVKEFYSRAKSYLKI-----QPIYKI 461

  Fly   679 -----GEYIIFHI---------RTNFYLEEFNYLIMSKGVILVNDRETI-------TEGIKTIAV 722
                 .|.:|.|.         .||   ..|:||:||||.|..:.|..|       ..|.....:
 Frog   462 LECQKQEKVIVHFILSAEGVGETTN---AVFHYLVMSKGGIAGHGRHEIEISPNQNASGTFWFRL 523

  Fly   723 VLSSEMAPVATIVVWKINQQGQVVADSLTFPVNGISRNNFTVYINNRKARTGEKVEVAIFGEPGS 787
            ...:::||.|..:|:.|.:.|:|:|||::..|.....|...:..:..:|..|...::.:...|.|
 Frog   524 TAGTDIAPSANFLVYLILESGEVIADSISLKVEKCFGNKVELSFSPSEALPGAPADLHLLTAPSS 588

  Fly   788 YVGLSGIDSAFYTMQAGNELTYAKIITKMSNFDEQTNGTYKHIWYSHEGNPDE------------ 840
            ...|..:|.:...::...||: |:.|..:....:.:.       |.|:||..|            
 Frog   589 LCALRAVDESVLILKPEAELS-AQTIYNLLPLQDLSG-------YIHDGNFLEELWDDPCIKMEP 645

  Fly   841 -----LVYFPAS-SFGVDANRTFEYSGLIVFTDGYVPRRQDTCNRTLGFGECLSGRCYRLEKQCD 899
                 :.|.|.: .:..|.....:..||.|||:..: |....|.....:....:|..:.:.....
 Frog   646 LFINGIYYMPTNPEWDTDTYTILKNLGLKVFTNARI-RPPLVCGPRSFYEHYGTGGPFAVPMSLS 709

  Fly   900 -GL-----FDCDDGTDEINCH-ARN----DTELLNYRKYRFNRVLRHYENVWLWKDVNIGPHGRY 953
             |:     .....|......| .||    :..:...|||        :...|||:.|.....|:.
 Frog   710 AGMGVQAGMGVQAGMSGAGLHIGRNIPVAEPVIETVRKY--------FPETWLWQLVETDADGKA 766

  Fly   954 IFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEACRQGEQVGIRVTVFN 1018
            ...|.|||....|....|..|...||| :::.:..|..||||:.:.:|.:..:||...::.||||
 Frog   767 DLAVTVPDTITTWKAGMFCTSQGAGFG-LSETISLVAFQPFFLELTLPYSAIRGEIFTLKATVFN 830

  Fly  1019 YMITPIEAIVVLHDSPDY--KFVHVEEDGIVRSYNPRTSFGEHQFFIYLEAQGTTVVYVPVVPQR 1081
            |:...|...::|.||..:  |...|:|||..                 :.|.|...:...|..:.
 Frog   831 YLSQTIRVGILLEDSNQFLAKPTKVQEDGYC-----------------VTANGQVTLSWEVTLKS 878

  Fly  1082 LGNVDVTLHVATLLG---------------TDTITRTLHVESDGL-PQYRHQSVLLDLSNRAYVL 1130
            ||.|:.|:...||.|               .||||:.:.||.:|: .:..|.:::....:..   
 Frog   879 LGEVNFTMSAETLNGEGLCENEIVSPAQGRKDTITKHIIVEPEGVKKEETHSTMICGKGSEI--- 940

  Fly  1131 EYMHVNVTQTPEIPYQVDRYFVYGSNKARISVVGDVVGPIFPTMPVNASSLLSLPMESGEQNAFS 1195
                     |..||.::....|.||.:|..|.|||::|    |...|..:|:.:|...||||...
 Frog   941 ---------TENIPLKLPEKVVEGSARAYFSAVGDILG----TAMQNLGNLVQMPYGCGEQNMVL 992

  Fly  1196 FAANLYTIMYMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRSDWNNSDSSVWLTSY 1260
            |...:|...|:...||....::.....:|:.|||:|||:..||||:|.|...:  .:.:.|||::
 Frog   993 FTPIIYISEYLNKTNQLTPEMKSKTLSYMSTGYQKQLSYKHPDGSYSAFGQRY--GEGNTWLTAF 1055

  Fly  1261 CLRVFQEASFYEWENFIWIDATIIEKNMRWLLQHQTPQGSFFEVTWLPDRKMNRTNFDKNITLTS 1325
            .::.|..|..:     |:|:..:|...:.||...|.|.|.|..|..|.:..| :...|..:||.:
 Frog  1056 TMKSFARARAH-----IYIEEKLITGALLWLSIRQKPNGCFHSVGKLFNNAM-KGGVDDEVTLAA 1114

  Fly  1326 HVLITL---------ATVKD----ISGTLGSRVALATQRALAY---IERNMDFLRHQAQPFDVAI 1374
            ::.|.|         .||::    :...||.:..:.|:..:||   :...||..|...|..|   
 Frog  1115 YITIALLEYPLPVTHPTVRNALFCLESALGGKNGIYTKALMAYAFTLAGRMDIRRQLLQSLD--- 1176

  Fly  1375 TAYALQLCNSPIAEEVFAILRRQARTIGDFMYWGNQEIPQPPRKLENQKWFS----LPRLPY-EY 1434
                    ...|.::                  |...:.:|.        ||    :.|.|| ..
 Frog  1177 --------EQAIKKD------------------GTVHLHRPE--------FSDDSGVDRFPYRRA 1207

  Fly  1435 DSLNIETTAYALLVYVARREF------FVDPIVRWLNSQRLNDGGWASTQDTSAALKALVEYTVR 1493
            .|..:|..:|.||..:::...      ....:|.|:..|:..:||::|||||..||:||..|   
 Frog  1208 PSAEVEMNSYMLLALLSKHNVSDEDLTLATQVVSWMIKQQNPNGGFSSTQDTVVALQALSLY--- 1269

  Fly  1494 SRLREVSSLTVEIEA----SSQGGKTQT--LYIDDTNLAKLQSIEIPDAWGTIKVQAKGAGYAIL 1552
                  .|||:..:|    |....||..  .:::|:|...||.|.:.:..|.......|:|...|
 Frog  1270 ------GSLTLSHDAMRTVSLSLDKTPVAEFHVEDSNRLLLQRIALKEVPGDYLATVSGSGCLYL 1328

  Fly  1553 QMHVQYNVDIEK--------FQTKPPV-PAFGLHTKAIFHGRNQSHISYVACQNWINQNESERSG 1608
            |..::|||.|.|        ..|.|.. ....|.|..|.     :::|||..:  :|.|      
 Frog  1329 QTTLRYNVPIPKEDAPFTISVTTDPETCDRKSLKTFTIV-----ANVSYVGKR--LNSN------ 1380

  Fly  1609 MAVLDVAIPTGYWIQQQKLDTYVLSNRVRNLRRARYLERKIVFYFDYLDHEDICVNFTIERWYPV 1673
            |||::|.:|:||...:..:.....|||:  ::||.....:::.||:.|..:.....|::|:..|:
 Frog  1381 MAVVEVKLPSGYIPIKPSVKKMTASNRL--IQRAEAHANEVIVYFESLFKDIQSFRFSVEQEIPI 1443

  Fly  1674 ANMSRYLPVRIYDYYAPERFNESIFDA 1700
            .|: :...|.:||||..:....:.:||
 Frog  1444 GNL-QPATVVVYDYYETDDLAITKYDA 1469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 32/105 (30%)
A2M_N_2 669..799 CDD:285005 35/152 (23%)
LDLa 886..913 CDD:238060 3/32 (9%)
A2M 940..1030 CDD:278630 29/89 (33%)
ISOPREN_C2_like 1177..1490 CDD:298658 86/339 (25%)
A2M_comp 1226..1492 CDD:284982 74/292 (25%)
A2M_recep 1607..1695 CDD:284981 24/87 (28%)
LOC100489060XP_002938549.2 YfaS <124..>1065 CDD:225248 254/1148 (22%)
A2M_N 124..216 CDD:280081 28/95 (29%)
A2M_N_2 455..600 CDD:285005 35/152 (23%)
A2M 752..838 CDD:278630 29/86 (34%)
A2M_2 971..1269 CDD:239227 86/342 (25%)
A2M_comp 1023..1270 CDD:284982 74/300 (25%)
A2M_recep 1379..1467 CDD:284981 25/96 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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