DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and LOC100487580

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_031761620.1 Gene:LOC100487580 / 100487580 -ID:- Length:1472 Species:Xenopus tropicalis


Alignment Length:1677 Identity:372/1677 - (22%)
Similarity:620/1677 - (36%) Gaps:383/1677 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 EPTYFIVASRMVRPGLIYQVSVSILQAQYPITVHASIACDGVQISGDSKDVKEGIPETLL----M 189
            :|.|.:....:::.|......::||....|:.::.::...|...|..|:.|:|   :|:.    .
 Frog    46 KPRYALSVPAVLKSGENSTACINILDNDSPLQLNVNLEFYGANYSIFSETVQE---KTIFKCKEF 107

  Fly   190 RIPPTSVTGSYKLRVEGFYQNVFGGLAFLNETRLDFSQRSMTI-------FVQTDKPLYMQGETV 247
            .:|..|:|      |..|...|..|   ..:|.::  :||..|       |||.||.:|..|:.|
 Frog   108 TVPAVSMT------VPVFITMVATG---PRDTIME--RRSAVIGKMENINFVQLDKSIYKAGQKV 161

  Fly   248 RFRTIPITTELKGFDNPVD-----VYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQPTFGEWTI 307
            :.|.|.:...|:    ||.     :|:|||....:.:||::.|..|.|:|||.|....|.|  |.
 Frog   162 QCRLISLNPLLR----PVQETYTAIYILDPLGSRIFQWLNKTSRQGLVALEYLLLSDATLG--TY 220

  Fly   308 RVIAQ---GQQEESHFTVEEYYQTRFEVNVTMPAYFFTTDPFIYGRVMANFTSGLPVRGNLTIKA 369
            .::|:   |......|.|.||...|:.|.|..|......|..|..:|.|.:|.|..|.|.|:   
 Frog   221 NIVAERISGPAVSQPFEVAEYALPRYSVTVAAPNTISIQDQNITFQVNAKYTYGQGVPGKLS--- 282

  Fly   370 TIRPIGYFSNQVLNEKYRLGRSPLEQTNLYNERWRYNNPNQNPQ-VQYNVPGQLPQDG-----AD 428
                            .||.|.       ||..:...:.|:.|: :..|:.|.:...|     ||
 Frog   283 ----------------GRLCRK-------YNYYYPGMSCNRKPEGLCQNIAGDVDPSGTFNYTAD 324

  Fly   429 LSQDILYRNQYVVERHYQFDEEWPFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLR 493
            |:...|.|....:...||.                           ||..    |||.       
 Frog   325 LALFQLERGGLDMVLSYQI---------------------------TLTE----NGTG------- 351

  Fly   494 ELELLVPNLANSEVLITATVGEKFYDEIISGYSVARVYNSSLRVVFLGDSPQVFKPAMPFTTYLA 558
                 |....:..|.|:..:....:|     |...:.|               :||.:|:...:.
 Frog   352 -----VQVTESGSVSISNLIARVSFD-----YQAIQPY---------------YKPGIPYRVAMT 391

  Fly   559 VEYHDGSPIDPNLLRQGLMEVSG-----FVESRNGGRRDWPAQRLPMSQQSDGIWEVKIDIRNDL 618
            :....|:|:....:.   :.|||     ....|||                      |:....|:
 Frog   392 LVNAAGNPLSNETIE---LRVSGNNVQNLTTDRNG----------------------KVRYELDV 431

  Fly   619 NLDDRPQARDFLNGVQNMRLQA-----------NFVDPRGERIQTELLLVSHYSPR-NQHIKVTT 671
            :..::||          :.|||           |:|.|   ....::..|:.:..| ..:::::.
 Frog   432 SGYEQPQ----------LDLQAIYKNAETCYDPNWVMP---IYSNDVYTVTRFFSRTGSYVEISA 483

  Fly   672 STEKPVVGEYIIFHIRTNFYLE----------EFNYLIMSKGVILVNDRETIT------EGIKTI 720
            ..::...|.  .:.|:.::.|.          .|.||:|||..|:.:....:.      .|..::
 Frog   484 PQQELSCGN--SYTIKAHYSLSPKALGNVTNVSFYYLVMSKTKIVKSGEHLVALNSRPQRGTFSL 546

  Fly   721 AVVLSSEMAPVATIVVWKINQQGQVVADSLTFPVNGISRNNFTVYINNRKARTGEKVEVAIFGEP 785
            .:.:|.|:||...::|:.: .|.:|:|..:.........:..::..:..:...|..|.:.:..:|
 Frog   547 NLTVSQELAPGFDVIVYSM-LQSEVIAHKIHLNTEKCFEHQVSLSFSASQGTPGSNVNLTLRADP 610

  Fly   786 GSYVGLSGIDSAFYTMQAGNELTYAKIITKMSNFDEQTNGTYKHIWYSHE--GNP---------- 838
            .|..||..|||:...:..|.:||..::...:...  ..|| |....|:.|  ..|          
 Frog   611 RSLCGLLAIDSSLILLGPGTQLTAERVYNALQYL--SLNG-YSVGEYNVEPAAPPCIDSENRVLD 672

  Fly   839 DELVYFPASSFGV-DANRTFEYSGLIVFTDG--YVPRRQDTCNRTLGFGECLSGRCYRLEKQCDG 900
            |.|||.|....|. :....|:.:||...|:.  |.|........||||                 
 Frog   673 DGLVYQPVQFPGQGNTYNEFKSAGLHFATNSSIYKPELCGFYGYTLGF----------------- 720

  Fly   901 LFDCDDGTDEINCHARNDTEL-------LNYRKYRFNRVLRHYENVWLWKDVNIGPHGRYIFNVE 958
                        .|:...|.|       ::......:.|.:.:..||.:..|.:|..|.....::
 Frog   721 ------------FHSNMATPLSATLPVSVSVPGEPISTVRKSFPEVWNFDIVAVGDTGSASPALK 773

  Fly   959 VPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEACRQGEQVGIRVTVFNYMITP 1023
            .||....|..|.|.:|..||.|:......:....|||:.|.:|.:..:||.:.:|..|.||:...
 Frog   774 APDTITQWQASMFCLSEGKGLGVTKYPSNFTSSLPFFVEVSVPFSFTRGEMLLLRAFVSNYLNQC 838

  Fly  1024 IEAIVVLHDSPDYKFVHVE--EDGIVRSYNPRTSFGEHQFFIYLEAQGTTVVYVPVVPQRLGNVD 1086
            |:..|.|..|.||..|..|  :|..|   .|:   |...:...:.|....|:...|..|      
 Frog   839 IKVRVTLQPSKDYTAVLQEGTQDMCV---CPK---GRASYSWNVTANSLGVISFNVTAQ------ 891

  Fly  1087 VTLHVATLLG---------TDTITRTLHVESDGL-PQYRHQSVLLDLSNRAYVLEYMHVNVTQTP 1141
            .|...||..|         :||:.:|:.||::|: .:..:.:::....|.|              
 Frog   892 TTFIGATCGGPPNTTQPPRSDTVIKTVIVEAEGIEKEVTYSNLVCVEGNNA-------------- 942

  Fly  1142 EIPYQV--DRYFVYGSNKARISVVGDVVGPIFPTMPVNASSLLSLPMESGEQNAFSFAANLYTIM 1204
            :||:.:  ....|.||.||.::|:||.:|....    |..||:.:|...||||..........:.
 Frog   943 QIPFSITPPANMVKGSAKASVTVIGDPLGHAVN----NPDSLIQMPTGCGEQNLVKLLPIPAVLA 1003

  Fly  1205 YMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRSDWNNSDSSVWLTSYCLRVFQEAS 1269
            |:....|..|.::..|..:|..||.|||.|.|.||:||.|..  .:.:.|.|||:..|..||:. 
 Frog  1004 YLNCSGQLTKEIQDKAVQYMATGYVRQLGFKRYDGTFSAFGQ--RDPEGSSWLTALSLYTFQKI- 1065

  Fly  1270 FYEWENFIWIDATIIEKNMRWLLQHQTPQGSFFEVTWLPDRKMNRTNFDKNITLTSHVLITLATV 1334
                :.:..:|.|:|.:.:..|.:.|..|...|:|:........:...:..|:.|::|:..|...
 Frog  1066 ----KQYTLVDPTVINQGLVALEKSQDLQSGCFKVSGTLFNSELKGGAENEISFTAYVVAILMET 1126

  Fly  1335 KDISGTLGSRVALATQRALAYIERNMDFLRHQAQPFDVAITAYALQLC-NSPIAEEVFAILRRQA 1398
            .........|..|....|.:..|:.:         :::|:..||..|. |........|.|::.|
 Frog  1127 NYPGAQTLLRNGLGCLDAASRREQTL---------YNLALLFYAFSLSGNEERRNATLAKLKKLA 1182

  Fly  1399 RTIGDFMYWGNQEIPQPPRKLENQKWFSLPRLPYEY---DSLNIETTAYALLVYV------ARRE 1454
            ......::|...:.|            ...:.|:.|   .|.:||.|.|.||.:.      ...:
 Frog  1183 IHENGGIHWEQTDKP------------IAEKYPFFYAPPPSADIEITGYVLLGFTKGPAPSQEEK 1235

  Fly  1455 FFVDPIVRWLNSQRLNDGGWASTQDTSAALKALVEYTVRSRLREVSSLTVEIEASSQGGKTQTLY 1519
            .::..|..||..|:.:.||:.||.||..||:||.||   |.|......|..:..|.......|..
 Frog  1236 SYMTQIAVWLVRQQNSQGGFRSTADTVVALQALAEY---SCLVYKKGATNRVTVSLARQVIATFN 1297

  Fly  1520 IDDTNLAKLQSIEIPDAWGTIKVQAKGAGYAILQMHVQYNVDIEKFQTKPPVPAFGLHTKAIFHG 1584
            :..:|...:|...:|...|.......|.|..::|..|:|||.:.:..:     .|.|..      
 Frog  1298 VQPSNRLLVQRRMLPSQQGNYSFGVSGNGCCLIQSTVKYNVPVVRKNS-----TFSLSV------ 1351

  Fly  1585 RNQSHISYVACQNW------IN-----QNESERSGMAVLDVAIPTGYWIQQQKLDTYVLSNRVRN 1638
                :.|..:|.|.      ||     .....:|.|||:|:.:.:||.:|.|.|    |..| :.
 Frog  1352 ----NTSSGSCINGAAFIIPINLTLSYNGRKNQSNMAVVDMKLLSGYSVQYQSL----LQLR-QQ 1407

  Fly  1639 LRRARYLERKIVFYFDYLDHEDICVNFTIERWYPVANMSRYLP--VRIYDYY 1688
            :.:...:...::.|...:..|.|.:..::|....|.|   :.|  :.:||||
 Frog  1408 VPKVEQINNHLIIYLSSVQREPISLPVSLEMGNRVQN---FQPQSIYVYDYY 1456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 37/114 (32%)
A2M_N_2 669..799 CDD:285005 28/145 (19%)
LDLa 886..913 CDD:238060 0/26 (0%)
A2M 940..1030 CDD:278630 26/89 (29%)
ISOPREN_C2_like 1177..1490 CDD:298658 81/322 (25%)
A2M_comp 1226..1492 CDD:284982 70/275 (25%)
A2M_recep 1607..1695 CDD:284981 23/84 (27%)
LOC100487580XP_031761620.1 A2M_N 147..238 CDD:396416 32/96 (33%)
MG3 240..332 CDD:407663 29/117 (25%)
MG4 377..461 CDD:407661 22/136 (16%)
A2M_N_2 479..626 CDD:400170 28/149 (19%)
A2M 754..845 CDD:395153 27/90 (30%)
ISOPREN_C2_like 973..1271 CDD:415487 81/329 (25%)
A2M_recep 1381..1465 CDD:400149 23/84 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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