DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and cd109

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_031758448.1 Gene:cd109 / 100486953 XenbaseID:XB-GENE-954886 Length:1433 Species:Xenopus tropicalis


Alignment Length:1675 Identity:405/1675 - (24%)
Similarity:694/1675 - (41%) Gaps:334/1675 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PTYFIVASRMVRPGLIYQVSVSILQAQYP-ITVHASIACD-GVQISGDSKDVKEGIPETLLMRIP 192
            |.:.|.:...:|||:...:.:.:||...| :.|.|.:..| ...:.|:|...:.|....:|.::|
 Frog    27 PIFLITSPMDIRPGVNLTLGIEMLQESPPLVKVVAQLQKDEHTLLEGESFFKRGGFGTLVLPQLP 91

  Fly   193 PTSVTGSYKLRVEGFYQNVFGGLAFLNETRLDFSQRSMTIFVQTDKPLYMQGETVRFRTIPITTE 257
            ..||.|.|:|.|:|:.:.   .|.|.|:|.|:|..:..::|::|:...|..|:.|:.|.:..:..
 Frog    92 LNSVNGKYELNVKGYSEE---NLIFFNKTSLEFKSKGFSVFIETNSVFYKPGQEVKIRILAFSFH 153

  Fly   258 LKGFDNPVDVYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQPTFGEWTIRVIAQGQQEESHFTV 322
            :|.:.:.||:|:|||..:::::||..:..||.||....|||.|..|:|||:|....|.....|||
 Frog   154 MKPYKSTVDIYILDPQGNLIEQWLEEEMELGVVSQSLYLSDNPPLGDWTIKVKLHQQLHYQTFTV 218

  Fly   323 EEYYQTRFEVNVTMPAYFFTTDPFIYGRVMANFTSGLPVRGNLTIKATIRPIGYFSNQVLNEKYR 387
            .|....||||.:....|....:|.:.|.|.|.:|.|:||:|.|::.                   
 Frog   219 MEQVLPRFEVLLNTTLYHSIKNPHLEGTVTAKYTYGMPVKGKLSVM------------------- 264

  Fly   388 LGRSPLEQTNLYNERWRYNNPNQNPQVQYNVPGQLPQDGADLSQDILYRNQYVVERHYQFDEEWP 452
                 |...::|.::                        .::::|.:                  
 Frog   265 -----LSHNSIYKKK------------------------TNITKDFV------------------ 282

  Fly   453 FWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLRELELLVPNLANSEVLITATVG-EK 516
                                         .||...|.:...||:.|:.|.......:|..|. :.
 Frog   283 -----------------------------INGCARFSFSNVELKELMKNADYGSNKVTGPVDIDV 318

  Fly   517 FYDEIISG---------YSVARVYNSSLRVVFLGDSPQVFKPAMPFTTYLAVEYHDGSPIDPNLL 572
            ...|.::|         :.:.:.||    :.|| |.|.|.||.:.||..|.:..:||..:... .
 Frog   319 NVKESLTGITQNVTTSVFVIDKEYN----IEFL-DHPTVLKPMLNFTIRLQIVRYDGRKLTAE-E 377

  Fly   573 RQGLMEVSGFVESRNGGRRDWPAQ-RLPMSQQSDGIWEVKID----IRNDLNLDDRPQARDFLNG 632
            |...:.|: ..::|....||...: ....::..|.:..:::.    .:|.:...:.|...|    
 Frog   378 RDNEVAVT-VTQTRRFNFRDNSVELNATENESEDNVEMIQLTRYTVPKNGIICIEIPLLAD---- 437

  Fly   633 VQNMRLQANFVDPRGERIQTELLLVSHYSPRN-QHIKVTTSTEKPVVGEYIIFHIRTNFYLEEFN 696
            :.::.::|.|:|.:......:|     :|..| .:|::..:.:...||......:..:|.|::.:
 Frog   438 IMHLYIKAEFLDAKNNLFINDL-----FSSLNGTYIQIKKADQDLKVGIPYTLSVDGSFPLKDIS 497

  Fly   697 YLIMSKGVILVNDRETITEGIKTIAVVLSSEMAPVATIVVWKINQQGQVVADSLTFPVNGISRNN 761
            ||::|||.|:...:    ...|.|.:...:...|...::|:.:...|.|..|.....|..|..|.
 Frog   498 YLVVSKGQIVAGGK----GNPKNITLNPENTWTPEVCLIVYHVANDGTVTNDVTAVSVQPIFENK 558

  Fly   762 FTVYINNRKARTGEKVEVAI-FGEPGSYVGLSGIDSAFYTMQAGNELTYAKIITKMSNFDEQTNG 825
            ..:..|..:||..:.|.:.: ..||.|.|.||.||.....:....|::.|.::.::.::      
 Frog   559 VYISWNTTQARPADMVSLNVNVAEPNSLVVLSVIDKRVKLLGDRQEISTANVLKELKSY------ 617

  Fly   826 TYKHIWYSHEGNPDELVYFPASSFGV--DAN--------RTFEYSGLIVFTDGYVPRRQDTCNRT 880
            :..||  .|..||.|:  |...:.||  |||        ..|| ||..:...|.:|         
 Frog   618 STSHI--QHYTNPSEV--FEMCNIGVMTDANIEVHDHFDILFE-SGFDIPVQGALP--------- 668

  Fly   881 LGFGECLSGRCYRLEKQCDGLFDCDDGTDEINCHARNDTELLNYRKYRFNRVLRHYENVWLWKDV 945
            :.||.                                            .|:...:...|:||.:
 Frog   669 VNFGS--------------------------------------------PRIRSLFPETWIWKHL 689

  Fly   946 NIGPHGRYIFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEACRQGEQV 1010
            ..|.......:::|||....|:.||:.:|.:.||||:....:....||||:::.:|....:|||.
 Frog   690 KTGSTTHMTLDLKVPDVITTWITSAYVISENFGFGMLAPPEQLEAFQPFFLSLNLPSYVIRGEQF 754

  Fly  1011 GIRVTVFNYMITPIEAIVVLHDSPDYK----FVHVEEDGIVRSYNPRTSFGEHQFFIYLEAQGTT 1071
            .:.|.||||:....|..|.|..|..::    ||:..|.               |..:.:.:|...
 Frog   755 VLEVIVFNYLQKETEVSVTLEKSDAFEIQLAFVNASES---------------QQSVSVPSQEGK 804

  Fly  1072 VVYVPVVPQRLGNVDVTLHVATLLGTDTITRTLHVESDGLPQYRHQSVLLDLSNRAYVLEYMHVN 1136
            :|:.|:.|..||.:.:|:...:.|.:|.:|:.|.|:::|:.|...|::||||...........:|
 Frog   805 IVFFPIKPIHLGEIPITVKAISALASDAVTQKLQVKAEGVQQSHSQTLLLDLMGNKPKSISQTLN 869

  Fly  1137 VTQTPEIPYQVDRYFVYGSNKARISVVGDVVGPIFPTMPVNASSLLSLPMESGEQNAFSFAANLY 1201
            .|..|::        |.||.||.|:||||.:|....::    .||:.:|...||||...||.|::
 Frog   870 FTFPPDV--------VSGSEKAFITVVGDHLGLSIRSI----KSLIQMPYGCGEQNMIRFAPNIF 922

  Fly  1202 TIMYMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRSDWNNSD--SSVWLTSYCLRV 1264
            .:.|:....|.|:.:.......:..||||||.:.|.|||||.|    .|.|  .|.||:::.|:.
 Frog   923 IMEYLSRTKQLNEDVAHKLISFIKNGYQRQLVYQREDGSFSAF----GNKDPFGSTWLSAFVLQC 983

  Fly  1265 FQEASFYEWENFIWIDATIIEKNMRWLLQHQTPQGSFFEVTWLPDR---KMNRTNFDKNITLTSH 1326
            |.:|     ..||.:|..::...:.|||:||...|.|    |.|..   ...:......||||::
 Frog   984 FLKA-----RPFILVDPVVLHNTLTWLLKHQRKNGEF----WEPGTVIYSQIQGGHHSAITLTAY 1039

  Fly  1327 VLITLATVKDISGTLGSRVALATQRALAYIERNMDFLRHQAQPFDVAITAYALQLCNSPIAEEVF 1391
            ::..|.....:..:  |:||.||.    |:|..||.:  .:..:.:::..|||.|.....|.|..
 Frog  1040 IMAALIEYPGLKNS--SQVAAATD----YLESQMDEI--ISDNYTLSLVTYALSLVGRSKATEGL 1096

  Fly  1392 AILRRQARTIGDFMYWGNQEIPQPPRKLENQKWFSLPRLPYEYDSLNIETTAYALLVYVARREFF 1456
            .:|..:|...|...:|.:.              .|..:.|.   |.:|..:|||||.||.:....
 Frog  1097 DLLNMRAEQEGQLRFWRSS--------------ISSCQHPC---STDIVISAYALLSYVVQNRIA 1144

  Fly  1457 VD-PIVRWLNSQRLNDGGWASTQDTSAALKALVE----YTVRSRLREVSSLTVEIEASSQGGKTQ 1516
            .. .:::||:.||.:.||::|||||..||:|:..    ||:.   :::.::||:   |.....|.
 Frog  1145 EGMAVMKWLSQQRSHLGGFSSTQDTIIALQAMSSFASVYTIN---KQILAITVD---SHPLNSTA 1203

  Fly  1517 TLYIDDTNLAKLQSIEIP-DAWGTIKVQAKGAGYAILQMHVQYNVDIEKFQTKPPVP-------- 1572
            |..||..|...||:.::. .....:.|.|:|.|:||||.|..||:       |..||        
 Frog  1204 TFQIDSNNRILLQTKQLAVQQQMNLTVHAEGTGFAILQFHTIYNL-------KNSVPGRYKSISS 1261

  Fly  1573 --AFGLHTKAIFHGRNQSHISYVACQNWINQNESERSGMAVLDVAIPTGYWIQQQKLDTYVLSNR 1635
              ||.|....:.:..|.:.:|...|...|.::.|.::||.::.|.:.:|:.:..:.:....    
 Frog  1262 QDAFDLGITVLDNKDNLNVVSLNICTRSIPRDGSTQTGMVLMQVDLLSGFSLVPEGIPMKY---- 1322

  Fly  1636 VRNLRRARYLERKIVFYFDYLDHEDICVNFTIERWYPVANMSRYLPVRIYDYYAP-----ERFNE 1695
              .:::..|.|.||..|.|.|:..::|:|....|.:.|....... |.:.|||.|     ..:|.
 Frog  1323 --PIKKVDYNEGKINIYLDSLNQTEVCINIPATRDFKVGYTQEAF-VYVIDYYDPGQRAIRSYNS 1384

  Fly  1696 SIFDALPTYLLNICEVCGSSQCPYCSIYNMGWRASMSMSLLFFSVFIYLL 1745
            .:...     ::.|..| :..|..|...|...|...::.:.:  :||.||
 Frog  1385 EVMQQ-----VSPCSFC-NDDCNQCITGNHALRTEQTLFINY--LFIILL 1426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 35/99 (35%)
A2M_N_2 669..799 CDD:285005 32/130 (25%)
LDLa 886..913 CDD:238060 0/26 (0%)
A2M 940..1030 CDD:278630 30/89 (34%)
ISOPREN_C2_like 1177..1490 CDD:298658 95/322 (30%)
A2M_comp 1226..1492 CDD:284982 83/275 (30%)
A2M_recep 1607..1695 CDD:284981 20/92 (22%)
cd109XP_031758448.1 YfaS 57..1155 CDD:225248 320/1344 (24%)
A2M 683..774 CDD:395153 30/90 (33%)
A2M_2 895..1179 CDD:239227 95/325 (29%)
A2M_recep 1298..1382 CDD:400149 20/90 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I9665
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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