DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and LOC100006895

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_001923676.2 Gene:LOC100006895 / 100006895 -ID:- Length:1449 Species:Danio rerio


Alignment Length:1711 Identity:355/1711 - (20%)
Similarity:629/1711 - (36%) Gaps:464/1711 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 PTYFIVASRMVRPGLIYQVSVSILQAQYPITVHASIACDGVQISGDSKDVKEGIPETLLM----- 189
            |::.::...::..|...::..|:|.....:.::..:              .:|...|||:     
Zfish    36 PSFMVMFPIVIESGSEAKLCASLLNPNESLVMNIYL--------------NDGNQSTLLLQEKAE 86

  Fly   190 ---------RIPPTSVTGSYKLRVEGFYQNVFGGLAF--LNETRLDFSQRSMTIFVQTDKPLYMQ 243
                     :.|........|::||      ..|.:|  ..|.::.|.......|:|||||:|:.
Zfish    87 QEFHRCFNFKAPLAKAETVQKIKVE------LQGKSFEMTEERKVMFKSYDPLTFIQTDKPIYIP 145

  Fly   244 GETVRFRTIPITTELKGFDNPV-DVYMLDPNRHILKRWLSRQSNLGSVSLEYKLSDQPTFGEWTI 307
            |:||.||.:.:.......|... .|.:.|...:.:.:|.:..|....:...|:|:.:...|.:.:
Zfish   146 GQTVNFRIVTLDKNFAPLDQQYSSVVLEDSQDNRIGQWTNVSSTRWILQRSYELNPECREGTYKL 210

  Fly   308 RVIAQGQQEESH-FTVEEYYQTRFEVNVTMPAYFFTTDPFIYGRVMANFTSGLPVRGNLTIKATI 371
            :... |:.|..| |.|::|...:|||.|..|......:..:...|.|.:|.|.||.|...:|...
Zfish   211 KTFI-GEMEVLHYFKVKKYVLPKFEVTVKKPNKVSVDEEELSIEVCAKYTYGQPVPGKSWVKVCR 274

  Fly   372 RPIGYFSNQVLNEKYRLGRSPL---EQTNLYNERWRYNNPNQNPQVQYNVPGQLPQDGADLSQDI 433
            ..:.||..:..|        ||   |.|.:.......:|        :.|...|.....:..:|.
Zfish   275 NSVPYFHTKDFN--------PLCSEETTEITKTGCAIHN--------FGVSVFLNSTLKERLKDS 323

  Fly   434 LYRNQYVVERHYQFDEEWPFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGTFDFKWPLRELELL 498
            |:....|.|                                        .||          |: 
Zfish   324 LHVEAVVTE----------------------------------------EGT----------EI- 337

  Fly   499 VPNLANSE-VLITATVGEKFYDEIISGYSVARVYNSSLRVVFLGDSPQVFKPAMPFTTYLAVEYH 562
              .:|.|| |.:|..:|:....::.:.|....|....:::....|:|...|     ..||     
Zfish   338 --TMAKSESVPLTYEIGKVKVIDLPNTYEHGSVIEGKIKLFDFKDAPIPNK-----EVYL----- 390

  Fly   563 DGSPIDPNLLRQGLMEVSGFVESRNGGRRDWPAQ-RLPMSQQSDGIWEVKIDI----RNDLNLDD 622
                                :|..|     |.:: .|.::..|||:....::.    :.|::|  
Zfish   391 --------------------LEGEN-----WSSKLLLNLTTDSDGLASFSLNTSSLSKKDISL-- 428

  Fly   623 RPQARDFLNGVQNMRLQANFVDPRGERIQTELLLVSHYSPRNQHIKV--TTSTEKPVVGEYIIFH 685
                      :.|:     :.|.|..:.:|     .::|...:.:|:  |.:...|...:.||.:
Zfish   429 ----------IANV-----YPDTRFRQYKT-----PYFSRDKKTVKLFQTATPYSPTFSKLIIEN 473

  Fly   686 IR------------TNFY-----LEEFN----YLIMSKGVIL--------VNDRETITEGIKTIA 721
            |.            ..:|     :|:||    |:::|||||:        |.....:..|..:..
Zfish   474 IEQPIKCGTEITATVKYYFVGETVEDFNTDIVYIVLSKGVIVHHGYEKVEVKSSNGVASGTMSFE 538

  Fly   722 VVLSSEMAPVATIVVWKINQQGQVVADSLTFPVNGISRNNFTVYINNRKARTGEKVEVAIFGEPG 786
            :.:.:::|||..|:.:.:.....::|.|.:..:.....|..::..:..||..|||..:.:..:||
Zfish   539 LSVGADVAPVVRILAYCVLPSENIIAASKSLDIEKCFGNKVSLQFSPAKAVPGEKNTLQLSAQPG 603

  Fly   787 SYVGLSGIDSAFYTMQAGNELTYAKIITKMSNFDEQTNGTYKHIWYSHEGNPDELVYFPASS--- 848
            |..|||.:|.:...:::|..|...||.:.:                     |.:.||:|.|:   
Zfish   604 SLCGLSAVDQSVLILESGKRLDADKIFSLL---------------------PFQYVYYPYSAEDE 647

  Fly   849 ---FGVDANRTFEYSGLIVFTDGYVPRRQD-----TCNRTLGFGECLSGRCYRLEKQCDGLFDCD 905
               ..|...|:       |.||......:.     ..|..:...||||.|.              
Zfish   648 QPCLPVRPRRS-------VLTDNVYNSLKSVGLKMASNLAVRVPECLSFRG-------------- 691

  Fly   906 DGTDEINCHARNDTELLNYRKYRFNRVLRH--------------------------YENVWLWKD 944
                            |.|.::| :.|:.|                          :...|:|..
Zfish   692 ----------------LTYHRFR-DIVMYHTSGRVGLGSSIESSTFDNSAVTIRTIFPETWIWDL 739

  Fly   945 VNIGPHGRYIFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEACRQGEQ 1009
            ..:|..|.....|.|||....|...||.:| |.|.|:...| :....||||:.:.:|.:..:||.
Zfish   740 AEVGDSGSTEVPVTVPDTITTWETEAFCLS-STGLGLAPPA-QLTVFQPFFLELSLPYSIIRGEI 802

  Fly  1010 VGIRVTVFNYMITPIEAIVVLHDSPDYKFVHVEEDGIVRSY------NPRTSF---------GEH 1059
            ..::.|||||:...|...|....|.||......:|    .|      |.|.:|         |..
Zfish   803 FELKATVFNYLSKCIMVKVSPAPSSDYTLKASSDD----QYSSCLCANGRQTFKWILTPSVLGVV 863

  Fly  1060 QFFIYLEAQGTTVV---YVPVVPQRLGNVDVTLHVATLLGTDTITRTLHVESDGLPQYRHQSVLL 1121
            ...:..||:.:..|   .:..||:| |.:|:            :||:|.|:::|:.:....|.||
Zfish   864 NVTVSAEAEASQTVCDNEIVSVPER-GRIDI------------VTRSLLVQAEGIEKTETNSWLL 915

  Fly  1122 -----DLSNRAYVLEYMHVNVTQTPEIPYQVDRYFVYGSNKARISVVGDVVGPIFPTMPVNASSL 1181
                 .||.          ||..|  :|..|    :.||.|:.:||:||::|....    |...|
Zfish   916 CPKGDSLSE----------NVDLT--VPKDV----IEGSAKSSVSVIGDILGRALQ----NLHGL 960

  Fly  1182 LSLPMESGEQNAFSFAANLYTIMYMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRS 1246
            |.:|...||||....:.|:|.:.|:....|....:.:.|...:..||||||::...||::|.|  
Zfish   961 LRMPYGCGEQNMAVLSPNIYILQYLENTKQLTSAIREKASSFLKSGYQRQLNYKHFDGAYSTF-- 1023

  Fly  1247 DWNNSDSSVWLTSYCLRVFQEASFYEWENFIWIDATIIEKNMRWLLQHQTPQGSFFEVTWLPDRK 1311
              ...|.:.|||::.||.|.:|     :.:.:||..||:....||:..:...|.|.:...|.:.:
Zfish  1024 --GYGDGNTWLTAFVLRSFGKA-----QKYTFIDPQIIQSAKDWLISRRDSDGCFIQQGRLFNNR 1081

  Fly  1312 MNRTNFDKNITLTSHV---LITLAT-VKDISGTLGSRVALATQRALAYIERNMDFLRHQAQPFDV 1372
            | :.....|:|:|:::   |:.|.| |.|...|.|    |:..|::....:|         .:..
Zfish  1082 M-KGGVTDNVTMTAYITASLLELETPVTDPVVTKG----LSCLRSVIEDVKN---------TYTT 1132

  Fly  1373 AITAYALQLC-NSPIAEEVFAILRRQARTIGDFMYWGNQEIPQPPRKLENQKWFSLPRLPYEYDS 1436
            |:.||...|. ::...:::|:.|...|.:.|..::|.......                  :..|
Zfish  1133 ALLAYTFSLARDTNTRQQLFSKLEDLAISDGPLVHWSQSASAD------------------DSAS 1179

  Fly  1437 LNIETTAYALLVYVARREF------FVDPIVRWLNSQRLNDGGWASTQDTSAALKALVEYTVRSR 1495
            |::|.::|.||..:.....      |.:.||.||..|:...||::|||||..||:||..|..:..
Zfish  1180 LDVEISSYVLLAVLTADSLTTADLGFANRIVSWLVKQQNAYGGFSSTQDTVVALQALSLYATKVF 1244

  Fly  1496 LREVSSLTVEIEASSQGGKTQTLYIDDTNLAKLQSIEIPDAWGTIKVQAKGAGYAILQMHVQYNV 1560
            ..:.|| ||.::::   |.:....::..|....|..::.:..|...::.||:....:||...||:
Zfish  1245 SSDGSS-TVTVQSA---GDSHHFDVNQDNKLLYQEKQLANVPGKYSIEVKGSACVSVQMAQFYNI 1305

  Fly  1561 DIEKFQTKPPVPAFGLHTKAIFHGRNQSHISYVACQNWINQN-----------ESERSGMAVLDV 1614
                   ..|..|..|...|...|         .|:....||           ...|:.|.::|:
Zfish  1306 -------PTPTEAKTLSIDAEVEG---------DCKKTFGQNLMLNVTVTYDGPQNRTNMVIVDI 1354

  Fly  1615 AIPTGYWIQQQKLDTYVLSNRVRNLRRARYL------------ERKIVFYFDYLDHEDICVNFTI 1667
            .:.:|:     ..||.:|..:.::.....:.            :..:|:..:.|..:.:.:...:
Zfish  1355 KLLSGF-----TADTSMLKTQRQSFDSLDFFGHAPVERIDSKDDHVLVYLEEVLKEDPVNLQIGL 1414

  Fly  1668 ERWYPVANMSRYLPVRIYDYY 1688
            .:...|.|:...: :::||||
Zfish  1415 NQIIQVKNLKPAV-IKVYDYY 1434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 27/101 (27%)
A2M_N_2 669..799 CDD:285005 36/160 (23%)
LDLa 886..913 CDD:238060 4/26 (15%)
A2M 940..1030 CDD:278630 30/89 (34%)
ISOPREN_C2_like 1177..1490 CDD:298658 86/323 (27%)
A2M_comp 1226..1492 CDD:284982 74/276 (27%)
A2M_recep 1607..1695 CDD:284981 14/94 (15%)
LOC100006895XP_001923676.2 A2M_N 134..225 CDD:280081 24/91 (26%)
A2M_N_2 471..616 CDD:285005 33/144 (23%)
A2M 734..822 CDD:278630 29/89 (33%)
A2M_2 953..1239 CDD:239227 86/330 (26%)
A2M_comp 1005..1241 CDD:284982 74/276 (27%)
A2M_recep 1347..1444 CDD:284981 14/94 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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