DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcr and si:ch211-212c13.10

DIOPT Version :9

Sequence 1:NP_524688.1 Gene:Mcr / 44071 FlyBaseID:FBgn0267488 Length:1760 Species:Drosophila melanogaster
Sequence 2:XP_001921519.4 Gene:si:ch211-212c13.10 / 100003785 ZFINID:ZDB-GENE-131118-12 Length:1437 Species:Danio rerio


Alignment Length:1714 Identity:361/1714 - (21%)
Similarity:648/1714 - (37%) Gaps:422/1714 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IKATFLESLHSR--EPTYFIVASRMVRPGLIYQVSVSILQAQYPITVHASIACDGVQISGDSKDV 179
            |.|..|.|::.:  .|::.:....::|.|...::..|:|.....:.::       :.::.:::  
Zfish    13 ILAIILLSVNGQMSTPSFMVTFPAVIRSGSEAKLCASLLNPNESLVMN-------IYLNQENQ-- 68

  Fly   180 KEGIPETLLM--------------RIPPTSVTGSYKLRVEGFYQNVFGGLAF-LNETRLDFSQRS 229
                 .|||:              :.|.........::||      ..|..| :.|.|....:|.
Zfish    69 -----STLLLQEKAEQEFHRCFNFQAPLVEAESVQTMKVE------LQGKNFKMTEERKVMLRRY 122

  Fly   230 MTI-FVQTDKPLYMQGETVRFRTIPITTELKGFDNPVDVYML-DPNRHILKRWLSRQSNLGSVSL 292
            ..: |:|||||:|:.|:||.||.|.:.......|...|..:| |...:.:.:|.:..|....:.|
Zfish   123 YPLTFIQTDKPIYIPGQTVFFRVISMDANFVPLDQTYDTVVLEDSQDNRIGQWTNVSSTRWILQL 187

  Fly   293 EYKLSDQPTFGEWTIRVIAQGQQEESHFTVEEYYQTRFEVNVTMPAYFFTTDPFIYGRVMANFTS 357
            .::|:.:...|.:.::.....:...:.|.|:.|...:|:|.:..|......|..|...|...:|.
Zfish   188 SHELNPEARQGLYKLKAYIGERMISNGFEVKNYVLPKFDVTIKQPETQSIGDNEIKIEVCGKYTY 252

  Fly   358 GLPVRGNLTIKATIRPIGYFSNQVLNEKYRLGRSPLEQTNLYNERWRYNNPNQNPQVQ--YNVPG 420
            |.|:.||..::.......|.|                                .|:|.  .|...
Zfish   253 GQPLPGNAWVEVCRDSFKYVS--------------------------------IPEVHLCLNKTA 285

  Fly   421 QLPQDGADLSQDILYRNQYVVERHYQFDEEWPFWVRKPEYQDSSYEAWSGTYRKTLPYLRYFNGT 485
            |:.:.|.               ..:.|:..                             .:.|.|
Zfish   286 QMNELGC---------------ASFIFNTS-----------------------------AFLNST 306

  Fly   486 FDFKWPLRELELLVPNLANSEVLITATVGEKFYDEIIS-GYSVARVYNSSLRVVFLGDSPQVFKP 549
            |:            .:|.|| :|:...|.|:..|.::: ..:::..|  .|..|...:.|.:|:.
Zfish   307 FE------------NDLQNS-LLVNTNVTEEGTDIVMTKSETISLTY--ELGKVTFAELPDLFEH 356

  Fly   550 AMPFTTYLAVEYHDGSPIDPNLLRQGLMEVSGFVESRNGGRRDWPAQRLPMSQQSDGIWEVKIDI 614
            .......:.|.:.:|:|:    ..:.:..:.|         |.|.:|.|                
Zfish   357 GSIIEGKIKVAHFNGTPV----YNKSVYLLEG---------RSWSSQLL---------------- 392

  Fly   615 RNDLNL-DDRPQARDFLNGVQNMRLQANFVDPRGERIQTELLLVSHYSPRNQHIKVTTSTEK--- 675
               ||| .||       ||:.........:......:...|....||..:..:.   |:.||   
Zfish   393 ---LNLTTDR-------NGLAVFSFNTASLPSSDLHLMASLTSEVHYGYKTPYF---TADEKTVR 444

  Fly   676 ---------PVVGEYIIFHIR------------TNFY-----LEEFN----YLIMSKGVILVNDR 710
                     |.:.|.||.:|.            ..:|     :::||    |:::|:|||:.:..
Zfish   445 LLQPATPYSPTLSELIIENIEQPLKCDTEITATVKYYFVGETVKDFNTDIVYMVLSRGVIIHHGY 509

  Fly   711 ET---------ITEGIKTIAVVLSSEMAPVATIVVWKINQQGQVVADSLTFPVNGISRNNFTVYI 766
            |.         :..|..:..:.:.:::|||..|:.:.:.....|:|.|....|....||..::..
Zfish   510 EKVEVKSSSNGVASGTMSFKLSVGADVAPVVQILAYCVLPSEIVIAGSRKLDVEKCFRNKVSLQF 574

  Fly   767 NNRKARTGEKVEVAIFGEPGSYVGLSGIDSAFYTMQAGNELTYAKI-----ITKMSNFDEQTNGT 826
            :..||..|||..:.:..:.||..|||.:|.:...:::|..|...||     :..||::       
Zfish   575 SPAKAVPGEKNTLQLSAQSGSLCGLSAVDQSVLILESGKRLNADKIFNLLPVQYMSDY------- 632

  Fly   827 YKHIWYSHEGNPDELVYFPASSFGVD-ANRTFEYSGLIVFTDGYVPRRQDTC------NRTLGFG 884
                .||.|...:.|......:...| |..|.:..||.:.|:..|  |:..|      |....||
Zfish   633 ----LYSVEDEQECLHVRSRRAVHTDSAYETLKSVGLKMATNLIV--REPQCLTYRGLNYHRSFG 691

  Fly   885 ECLSGRCYRLEKQCDGLFDCDDGTDEINCHARNDTELLNYRKYRF-----NRVLRH-YENVWLWK 943
            |                  .|...|.:...|      :||.:..|     :..:|. :...|:|:
Zfish   692 E------------------SDYSEDFVVKMA------MNYEEDSFAVNSPDATIRTVFPETWIWQ 732

  Fly   944 DVNIGPHGRYIFNVEVPDRPAYWMVSAFSVSPSKGFGMMNKALEYVGVQPFFINVEMPEACRQGE 1008
            ...:|..|.....|.|||....|.:.||.:| |.|.|:...| :....||||:.:.:|.:..:||
Zfish   733 LAEVGDSGSAEVPVTVPDTITTWEMDAFCLS-STGLGLAPPA-QLTVFQPFFLELSLPYSIIRGE 795

  Fly  1009 QVGIRVTVFNYMITPIEAIVVLHDSPDYKFVHVEEDGIVRSYNPRTSFGEHQFFIYLEAQGTTVV 1073
            ...::.|||||:...|...|....|.||......:|               |:...|.|.|....
Zfish   796 IFELKATVFNYLSKCIMVKVSPAPSSDYTLKASSDD---------------QYSSCLCANGRQTF 845

  Fly  1074 YVPVVPQRLGNVDVTLHV-----ATLLGT-----------DTITRTLHVESDGLPQYRHQSVLLD 1122
            ...:.|...|.|::|:..     .||...           ||:||:|.|:::|:.:.:..|.|| 
Zfish   846 KWILTPSVFGVVNITVSAEAEASQTLCDNEIVSVPERGRIDTVTRSLRVQAEGVEKIKIYSWLL- 909

  Fly  1123 LSNRAYVLEYMHVNVTQTPEIPYQVDRYFVYGSNKARISVVGDVVGPIFPTMPVNASSLLSLPME 1187
                  ..:...|:...|..:|..|    :.||.::.:||:||::|....    |...||.:|..
Zfish   910 ------CPQGSRVSDEVTLTLPSDV----IKGSVRSSVSVLGDILGRALQ----NLHGLLKMPYG 960

  Fly  1188 SGEQNAFSFAANLYTIMYMRLINQRNKTLEKNAFYHMNIGYQRQLSFMRPDGSFSLFRSDWNNSD 1252
            .||||....:.|:|.:.|:....|....:.:.|...:..||||||::...|||:|.|    .|.:
Zfish   961 CGEQNIAVLSPNIYILQYLENTKQLTSAIREKASGFLKSGYQRQLNYRHHDGSYSTF----GNGE 1021

  Fly  1253 SSVWLTSYCLRVFQEASFYEWENFIWIDATIIEKNMRWLLQHQTPQGSFFEVTWLPDRKMNRTNF 1317
            .:.|||::.||.|.:|     :.:|::|..||:....||:..:...|.|.:...|.:.:|.....
Zfish  1022 GNTWLTAFVLRSFDKA-----QRYIFVDPQIIQSAKDWLISRRDSDGCFIQQGRLFNSRMKGGVN 1081

  Fly  1318 DKNITLTSHVLITLATVKDISGTLGSRVALATQRALAYIERNMDFLRHQAQ----PFDVAITAYA 1378
            || :|:|:::..:|             :.|.|......:.:.:..||...:    .:..|:.||.
Zfish  1082 DK-VTMTAYITASL-------------LELETPVTNPVVTKGLSCLRFVIEDVKNTYTTALLAYT 1132

  Fly  1379 LQLC-NSPIAEEVFAILRRQARTIGDFMYWGNQEIPQPPRKLENQKWFSLPRLPYEYDSLNIETT 1442
            ..|. ::...:::|..|...|.:.|..::|.......                  :.|||::|.:
Zfish  1133 FSLARDTNTRQQLFNKLENLAISDGPLVHWSQSASAD------------------DSDSLDVEIS 1179

  Fly  1443 AYALLVYVARREF------FVDPIVRWLNSQRLNDGGWASTQDTSAALKALVEYTVRSRLREVSS 1501
            :|.||..:.....      |.:.||.||..|:...||::|||||..||:||..|..:....:.||
Zfish  1180 SYVLLAVLTADSLTTADLGFANRIVSWLVKQQNAYGGFSSTQDTVVALQALSLYATKVFSSDGSS 1244

  Fly  1502 LTVEIEASSQGGKTQTLYIDDTNLAKLQSIEIPDAWGTIKVQAKGAGYAILQMHVQYNVDIEKFQ 1566
             ||.::::   |.:|...::..|....|..::.:..|...::.||:....:|:.:.||:     .
Zfish  1245 -TVTVQSA---GDSQHFDVNQDNKLLYQEKQLANVPGKYSIEVKGSACVSVQIPLFYNI-----P 1300

  Fly  1567 TKPPVPAFGLHTKAIFHGRNQSHISYVACQNWIN-----QNESERSGMAVLDVAIPTGYWIQQQK 1626
            |.||.    :.|.::........::..|....:|     .....|:.|.::|:.:.:|:     .
Zfish  1301 TPPPT----IKTLSVEASVTGDCLASTAKNLMLNFTIKYSGTQTRTNMVIVDIKLLSGF-----T 1356

  Fly  1627 LDTYVLSNRVRNLRRARYLERKIVFYFDYLDHED--ICVN-----------FTIE--RWYPVANM 1676
            .||.:|:  :.....|..:||        :|.||  |.|.           :||:  :.:||.::
Zfish  1357 ADTSMLA--IPPHMYALLVER--------VDSEDDHIMVYLKEVPKNSPQLYTIQMKQAFPVRSL 1411

  Fly  1677 SRYLPVRIYDYYAPERFNESIFDA 1700
             |...:::||||.....:|:::.:
Zfish  1412 -RPAVIKVYDYYQTSDQSETLYSS 1434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
McrNP_524688.1 A2M_N 232..332 CDD:280081 26/101 (26%)
A2M_N_2 669..799 CDD:285005 39/171 (23%)
LDLa 886..913 CDD:238060 2/26 (8%)
A2M 940..1030 CDD:278630 30/89 (34%)
ISOPREN_C2_like 1177..1490 CDD:298658 84/323 (26%)
A2M_comp 1226..1492 CDD:284982 72/276 (26%)
A2M_recep 1607..1695 CDD:284981 23/102 (23%)
si:ch211-212c13.10XP_001921519.4 A2M_N 126..217 CDD:280081 23/90 (26%)
A2M_N_2 461..607 CDD:285005 33/145 (23%)
A2M 728..816 CDD:278630 29/89 (33%)
A2M_2 947..1233 CDD:239227 84/330 (25%)
A2M_comp 999..1235 CDD:284982 72/276 (26%)
A2M_recep 1342..1432 CDD:284981 24/105 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11188
eggNOG 1 0.900 - - E1_COG2373
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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