DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL30 and AT1G77940

DIOPT Version :10

Sequence 1:NP_524687.1 Gene:RpL30 / 44059 FlyBaseID:FBgn0086710 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_565164.1 Gene:AT1G77940 / 844129 AraportID:AT1G77940 Length:112 Species:Arabidopsis thaliana


Alignment Length:108 Identity:75/108 - (69%)
Similarity:87/108 - (80%) Gaps:0/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYAM 65
            ||..||.||:.|..|:|||||||||||.||||..||:||..|.||:||::|.|.||:||||||||
plant     1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAM 65

  Fly    66 LAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108
            |||..|.||:|.|::|||||||||||..|||.||||||||:|:
plant    66 LAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSI 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL30NP_524687.1 PTZ00106 2..109 CDD:185450 74/107 (69%)
AT1G77940NP_565164.1 PTZ00106 2..108 CDD:185450 73/105 (70%)

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