DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL30 and AT1G36240

DIOPT Version :10

Sequence 1:NP_524687.1 Gene:RpL30 / 44059 FlyBaseID:FBgn0086710 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_174853.1 Gene:AT1G36240 / 840530 AraportID:AT1G36240 Length:112 Species:Arabidopsis thaliana


Alignment Length:108 Identity:77/108 - (71%)
Similarity:87/108 - (80%) Gaps:0/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYAM 65
            |||.||.||:.|..|:|||||||||||.||||..||:||..|.||:||:||.|.||:||||||||
plant     1 MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAM 65

  Fly    66 LAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108
            |||..|.||:..|::|||||||||||..|||.||||||||:||
plant    66 LAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSL 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL30NP_524687.1 PTZ00106 2..109 CDD:185450 76/107 (71%)
AT1G36240NP_174853.1 PTZ00106 2..108 CDD:185450 74/105 (70%)

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