DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL30 and Gm6570

DIOPT Version :10

Sequence 1:NP_524687.1 Gene:RpL30 / 44059 FlyBaseID:FBgn0086710 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_001357792.1 Gene:Gm6570 / 625281 MGIID:3644100 Length:115 Species:Mus musculus


Alignment Length:108 Identity:84/108 - (77%)
Similarity:96/108 - (88%) Gaps:0/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYAM 65
            |||.:|.:|:||..|:||.||||||||.||||||||.:||||||||::|:|.|||||||||:|||
Mouse     1 MVAAEKTEKSLELINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEFYAM 65

  Fly    66 LAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108
            ||||.|.||||.|||||||||||:|||||:|.||||||||||:
Mouse    66 LAKTGVYHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSM 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL30NP_524687.1 PTZ00106 2..109 CDD:185450 83/107 (78%)
Gm6570NP_001357792.1 PTZ00106 2..107 CDD:185450 81/104 (78%)

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