DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL30 and Rpl30

DIOPT Version :10

Sequence 1:NP_524687.1 Gene:RpL30 / 44059 FlyBaseID:FBgn0086710 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_033109.1 Gene:Rpl30 / 19946 MGIID:98037 Length:115 Species:Mus musculus


Alignment Length:108 Identity:88/108 - (81%)
Similarity:97/108 - (89%) Gaps:0/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEIEYYAM 65
            |||.||.||:|||.|:||.||||||||.||||||||.:||||||||::|:|.|||||||||||||
Mouse     1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAM 65

  Fly    66 LAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSL 108
            ||||.|.||||.|||||||||||:|||||:|.||||||||||:
Mouse    66 LAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSM 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL30NP_524687.1 PTZ00106 2..109 CDD:185450 87/107 (81%)
Rpl30NP_033109.1 PTZ00106 2..107 CDD:185450 85/104 (82%)

Return to query results.
Submit another query.