DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shc and SHC1

DIOPT Version :10

Sequence 1:NP_524683.2 Gene:Shc / 44052 FlyBaseID:FBgn0015296 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_005245506.1 Gene:SHC1 / 6464 HGNCID:10840 Length:598 Species:Homo sapiens


Alignment Length:416 Identity:159/416 - (38%)
Similarity:217/416 - (52%) Gaps:69/416 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GDAGNRSGS--GTTSDGCIYPDDVIMGVGVAFNVRYTGCVEVKTSMKSLDFETRTQLARECINRV 67
            |:...|.||  ...:.|.::|:|.:||.||::.|||.|||||..||::|||.||||:.||.|:.|
Human   131 GEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEVLQSMRALDFNTRTQVTREAISLV 195

  Fly    68 CEAA-GLKSAGKRR------LTNFISDRPSMQHAGTNIIINVSSRALSLSNVETGEVIANHNMPR 125
            |||. |.|.|.:||      |::.:. |.:::.||..|.:.||:.:|:|...:..::||||:|..
Human   196 CEAVPGAKGATRRRKPCSRPLSSILG-RSNLKFAGMPITLTVSTSSLNLMAADCKQIIANHHMQS 259

  Fly   126 ISFASGGDNDTLDFLAYIAKNEDEWRACYVLECAGGQSEDLIVTIGKAFALRFNALSRLNDP--- 187
            ||||||||.||.:::||:||:....|||::|||..|.::|:|.|||:||.|||....| |.|   
Human   260 ISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLR-NPPKLV 323

  Fly   188 ---SADCNINQSCKENVKE------YYNDLPNKLPPEVPEPQQQQVQQPLHPHAPRVAQLNLKKP 243
               ......:.|..:..:|      ||||.|.|.|| :......::::...|.|.|....|.:.|
Human   324 TPHDRMAGFDGSAWDEEEEEPPDHQYYNDFPGKEPP-LGGVVDMRLREGAAPGAARPTAPNAQTP 387

  Fly   244 RDRLSSNL-----------IDLNSPPPDQTTNKLGHFDP-----------LQATTAANSVLPSV- 285
             ..|.:.|           :....|||.....:....||           .||...|....|:: 
Human   388 -SHLGATLPVGQPVGGDPEVRKQMPPPPPCPGRELFDDPSYVNVQNLDKARQAVGGAGPPNPAIN 451

  Fly   286 ----RDVFD------------GPQC-----PLTAEVWFHAGISRPISERLLQQDGDFLVRESQGK 329
                ||:||            .||.     .|..|.|||..:||..:|.|||.:||||||||...
Human   452 GSAPRDLFDMKPFEDALRVPPPPQSVSMAEQLRGEPWFHGKLSRREAEALLQLNGDFLVRESTTT 516

  Fly   330 RGQYVLTGLEGKTPKHLLLIDPEGVV 355
            .||||||||:...||||||:||||||
Human   517 PGQYVLTGLQSGQPKHLLLVDPEGVV 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShcNP_524683.2 PTB_Shc 19..178 CDD:269920 79/165 (48%)
SH2_SHC 293..396 CDD:198179 40/68 (59%)
SHC1XP_005245506.1 PTB_Shc 146..317 CDD:269920 81/171 (47%)
SH2_SHC 480..583 CDD:198179 39/63 (62%)

Return to query results.
Submit another query.