DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shc and shc1

DIOPT Version :9

Sequence 1:NP_524683.2 Gene:Shc / 44052 FlyBaseID:FBgn0015296 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_017206983.1 Gene:shc1 / 323818 ZFINID:ZDB-GENE-030131-2538 Length:593 Species:Danio rerio


Alignment Length:458 Identity:180/458 - (39%)
Similarity:241/458 - (52%) Gaps:98/458 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GDAGNRSGS--GTTSDGCIYPDDVIMGVGVAFNVRYTGCVEVKTSMKSLDFETRTQLARECINRV 67
            ||...|.||  ...:.|.::.|.|:...||::.|||.|||||..||::|||.||||:.||.|:.|
Zfish   164 GDEWTRHGSFVNKPTRGWLHSDIVVSTSGVSYTVRYMGCVEVLQSMRALDFNTRTQVTREAISVV 228

  Fly    68 CEAA-GLKSAGKR-----RLTNFISDRPSMQHAGTNIIINVSSRALSLSNVETGEVIANHNMPRI 126
            |||. |.|.|.:|     |..:.|..:.::|.||..|.:.||:.:|:|..::..::||||:|..|
Zfish   229 CEAVPGAKGAQRRRKPSSRCLSSILGKSNLQFAGMTITLTVSTSSLNLMAIDCKQIIANHHMQSI 293

  Fly   127 SFASGGDNDTLDFLAYIAKNEDEWRACYVLECAGGQSEDLIVTIGKAFALRFNALSRLNDPSA-- 189
            |||||||.||.:::||:||:....|||::|||:.|.::::|.|||:||.|||....: |.|..  
Zfish   294 SFASGGDPDTAEYVAYVAKDPVNQRACHILECSEGLAQEVISTIGQAFELRFKQYLK-NPPKVVT 357

  Fly   190 ----DCNINQSCKENVKE---------YYNDLPNKLP-----------------PEVP--EPQQQ 222
                ....:.|..|..:|         |||:.|.|.|                 |.:|  :|.|.
Zfish   358 PHDRMAPFDGSAWEEEEEDLAPPPEVPYYNNFPGKQPPPGGLVDMRTRPGHSTGPTLPYGQPSQN 422

  Fly   223 QV-QQPLHPHAPRV---------AQLNLKKPRDRLSSNLIDLNSPPPDQTTNKLGHFDPLQATTA 277
            .: :|||.|....|         :.:|:.|||                           |.|:.|
Zfish   423 DIHKQPLPPLPVGVKDGGLFDDPSYVNVDKPR---------------------------LPASAA 460

  Fly   278 ANSVLPSVRDVFD------------GPQCPLTA----EVWFHAGISRPISERLLQQDGDFLVRES 326
            ||.  .:.||.||            ....||..    |.|||..:||..:||||.:|||||||||
Zfish   461 ANG--NAHRDAFDMKPFDAALVVSGAVALPLAEQLQNEPWFHGPLSRRQAERLLTKDGDFLVRES 523

  Fly   327 QGKRGQYVLTGLEGKTPKHLLLIDPEGVVRTKDRIFDSISHLINYHWAHALPIISEDSELVLRNP 391
            ....|||||||.:|..||||||:||||||||||..|:|:||||:||..:.|||||..||:.|:.|
Zfish   524 GTTPGQYVLTGQQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNRLPIISAGSEVCLQQP 588

  Fly   392 VRR 394
            |.|
Zfish   589 VDR 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShcNP_524683.2 PTB_Shc 19..178 CDD:269920 76/164 (46%)
SH2_SHC 293..396 CDD:198179 64/106 (60%)
shc1XP_017206983.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595656
Domainoid 1 1.000 141 1.000 Domainoid score I4654
eggNOG 1 0.900 - - E1_KOG3697
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3036
OMA 1 1.010 - - QHG49816
OrthoDB 1 1.010 - - D1351843at2759
OrthoFinder 1 1.000 - - FOG0001057
OrthoInspector 1 1.000 - - otm25768
orthoMCL 1 0.900 - - OOG6_108540
Panther 1 1.100 - - O PTHR10337
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8103
SonicParanoid 1 1.000 - - X710
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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