DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pak and CLA4

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_014101.1 Gene:CLA4 / 855418 SGDID:S000005242 Length:842 Species:Saccharomyces cerevisiae


Alignment Length:865 Identity:271/865 - (31%)
Similarity:378/865 - (43%) Gaps:266/865 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DDSDRKKKTLKSKIKGSKPSHTDS-------KPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWAR 113
            |.:.:|...:.:|.:....|..|:       ...:|.||||.|.||||||..||.|.|||..|.:
Yeast   150 DSNSKKSIYIATKTESDLHSWLDAIFAKCPLLSGVSSPTNFTHKVHVGFDPETGSFVGMPTNWEK 214

  Fly   114 LLMNSNISKQEQKKNPQAVLDVLKWF---------------------DNTTKQRPSS----KYMT 153
            ||.:|.|:.::...|..||:.||:::                     .::.|..|:|    |...
Yeast   215 LLKHSRITGEDWNNNSAAVIQVLQFYQEYNGAGNPTNTLDKPQSGETSSSQKSLPNSYNDNKLRN 279

  Fly   154 NAITTHSGSSLSR-----------------VSSSSPSSTPTDSELHGSNSG-----GNLIGVQLG 196
            |::.:.|.|.:|.                 ||..|.|..|.:::|..|.|.     .|:...|..
Yeast   280 NSVNSKSSSGVSSSMVSQRKTSQPPNTKSPVSLGSGSLPPINTKLPTSQSNIPRHLQNVPNQQYP 344

  Fly   197 SMTLGPN-ANNVAVAGQILGNHYQQ--QQQHLLQQQQPLLHQNHNQHHMGISQSHSYNFVGHTVS 258
            .|..|.: .|.....|.:..|:.|:  |||...||||...||.:..||.|               
Yeast   345 KMRNGHSPTNGQFPRGPMHPNNSQRSLQQQQQQQQQQKQQHQQYPYHHQG--------------- 394

  Fly   259 SSTSQHSSANEDDMLGPQHPQQQPPPPPVASRPERTKSIYTRPIEDLQPAIIPMPVAPATTPATP 323
                                   |.|.|                            :|:.:|..|
Yeast   395 -----------------------PSPSP----------------------------SPSPSPLNP 408

  Fly   324 LQNHRTPGGISAPAASPMMHNNATTTLDKNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPSC 388
            .:.|               ||..      |..:..|.||.::::|..                  
Yeast   409 YRPH---------------HNMI------NPYSKQPQSPLSSQSTQN------------------ 434

  Fly   389 STTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHALPT 453
                     .|.||         :|..::.|.|                           |..| 
Yeast   435 ---------QAIPR---------YAQNSSPTAA---------------------------HFQP- 453

  Fly   454 IHCPTPTSSSRNSTVSFPVAVPLPPIVTPASPTPASIESPDLYTPEPTVAQVSAGGPSSQVAGNQ 518
                     .|.:        |.|||..|.:|.|::..:......:|...:.....|.:      
Yeast   454 ---------QRTA--------PKPPISAPRAPYPSNQNATSNTHVQPVAPKNDQSTPQT------ 495

  Fly   519 IAVPQAAVAPAATPNTRAANAKKKK-----MSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASG 578
              :.||...|.|........||.||     ||..||:.||:.:....||::.:..:||.||||||
Yeast   496 --MRQAPKRPDADVAQPGGVAKPKKPARPTMSTAEIMSKLKKVTVNADPSQCFKVIEKAGQGASG 558

  Fly   579 TVYTA-------------------IESSTGMEVAIKQMNLSQQPKKELIINEILVMRENKHPNVV 624
            :||.|                   .|...|.:||||||.||:||:||||:||||||::::|.|:|
Yeast   559 SVYLAERTHIPTESNMIELINNDIDEPHVGDKVAIKQMVLSKQPRKELIVNEILVMKDSRHKNIV 623

  Fly   625 NYLDSYL-VSEELWVVMEYLPGGSLTDVV--------TETCMDEGQIAAVCREVLQALEFLHANQ 680
            |:|::|| ..::||||||::.||||||::        :.:.:.|.|||.:.||..|.|:|||...
Yeast   624 NFLEAYLRTDDDLWVVMEFMEGGSLTDIIENSPTNDNSHSPLTEPQIAYIVRETCQGLKFLHDKH 688

  Fly   681 VIHRDIKSDNILLGLDGSVKLTDFGFCAQISPEQSKRTTMVGTPYWMAPEVVTRKQYGPKVDLWS 745
            :|||||||||:||.....||:|||||||:::.::|||.||||||||||||||.:::|..|:|:||
Yeast   689 IIHRDIKSDNVLLDTRARVKITDFGFCARLTDKRSKRATMVGTPYWMAPEVVKQREYDEKIDVWS 753

  Fly   746 LGIMAIEMVEGEPPYLNENPLKALYLIATNGKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALD 810
            ||||.|||:|||||||||:||||||||||||.|::|..:.||...:.||..||.|:|..|||..:
Yeast   754 LGIMTIEMLEGEPPYLNEDPLKALYLIATNGTPKLKHPESLSLEIKRFLSVCLCVDVRYRASTEE 818

  Fly   811 LLKHPFLKLARPLASLTPLI 830
            ||.|.|..:|.....||.|:
Yeast   819 LLHHGFFNMACDPKDLTSLL 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166 27/53 (51%)
STKc_PAK_I 558..818 CDD:270814 152/287 (53%)
S_TKc 566..817 CDD:214567 149/278 (54%)
CLA4NP_014101.1 PH_Cla4_Ste20 62..174 CDD:270097 5/23 (22%)
PBD 183..241 CDD:395634 28/57 (49%)
STKc_PAK 546..826 CDD:270789 150/279 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - O PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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