DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pak and YDA

DIOPT Version :10

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_176557.1 Gene:YDA / 842674 AraportID:AT1G63700 Length:883 Species:Arabidopsis thaliana


Alignment Length:657 Identity:171/657 - (26%)
Similarity:276/657 - (42%) Gaps:94/657 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 FVGHTVSSSTSQHSSANEDDMLGPQH-----PQQQPPPPPVASRPERTKSIYTRPIEDLQPAI-I 310
            |.....||..|:.|....|:::..:.     |.:.|.|   ::|..|.:|...|     .||: :
plant    29 FASEDRSSGRSRKSRRRRDEIVSERGAISRLPSRSPSP---STRVSRCQSFAER-----SPAVPL 85

  Fly   311 PMP-VAPATTPATPLQNHRTPGGISA---PAASPMMHNNATTTLDKNKNNATPTSPTTTKTTAET 371
            |.| |.|..|......|.....|:.|   |:..|:...:..|::..| ..|.|...|.:.::..:
plant    86 PRPIVRPHVTSTDSGMNGSQRPGLDANLKPSWLPLPKPHGATSIPDN-TGAEPDFATASVSSGSS 149

  Fly   372 EGTDATSTLLSATNPSC---STTPTT------------------DPAP-------AAPRGSLVET 408
            .|...:.:|||.....|   :.||..                  .|.|       |:||...:.|
plant   150 VGDIPSDSLLSPLASDCENGNRTPVNISSRDQSMHSNKNSAEMFKPVPNKNRILSASPRRRPLGT 214

  Fly   409 ATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHA------------LPTIHCPTPTS 461
            ...:.......:...:..:...|:.|.|...||..|..::|.            |.:..|.:|.|
plant   215 HVKNLQIPQRDLVLCSAPDSLLSSPSRSPMRSFIPDQVSNHGLLISKPYSDVSLLGSGQCSSPGS 279

  Fly   462 --SSRNSTVSFPVAVPL-----------PPIVTP--ASPTPASIESPDLYTP-EPTVAQVSAGGP 510
              :|.|:::...:|..|           .|:.:|  .||.|:|.......|| .|.....:.|.|
plant   280 GYNSGNNSIGGDMATQLFWPQSRCSPECSPVPSPRMTSPGPSSRIQSGAVTPLHPRAGGSTTGSP 344

  Fly   511 SSQVAGNQIAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQG 575
            :.::..|:....:..:.|....||...:......:...:........:...|..::.|...:|.|
plant   345 TRRLDDNRQQSHRLPLPPLLISNTCPFSPTYSAATSPSVPRSPARAEATVSPGSRWKKGRLLGMG 409

  Fly   576 ASGTVYTAIESSTGMEVAIKQMNL-SQQPKK----ELIINEILVMRENKHPNVVNYLDSYLVSEE 635
            :.|.||....|.:|...|:|::.| |..||.    :.:..||.|:...:|.|:|.|..|..|.::
plant   410 SFGHVYLGFNSESGEMCAMKEVTLCSDDPKSRESAQQLGQEISVLSRLRHQNIVQYYGSETVDDK 474

  Fly   636 LWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSV 699
            |::.:||:.|||:..::.| ....|..|....:::|..|.:|||...:|||||..|||:...|.|
plant   475 LYIYLEYVSGGSIYKLLQEYGQFGENAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPHGRV 539

  Fly   700 KLTDFGFCAQISPEQSKRTTMVGTPYWMAPEVVTRKQYGPK--VDLWSLGIMAIEMVEGEPPYLN 762
            |:.|||....|: .||...:..|:||||||||: :...|..  ||:||||...:||...:||:..
plant   540 KVADFGMAKHIT-AQSGPLSFKGSPYWMAPEVI-KNSNGSNLAVDIWSLGCTVLEMATTKPPWSQ 602

  Fly   763 ENPLKALYLIATNGK--PEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPFLK----LAR 821
            ...:.|::.|. |.|  |:|  .|.||...:||:.:||:.....|.:|..||.|.|::    :.|
plant   603 YEGVPAMFKIG-NSKELPDI--PDHLSEEGKDFVRKCLQRNPANRPTAAQLLDHAFVRNVMPMER 664

  Fly   822 PLASLTP 828
            |:.|..|
plant   665 PIVSGEP 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..139 CDD:395634
STKc_PAK_I 558..818 CDD:270814 94/269 (35%)
YDANP_176557.1 STKc_MEKK1_plant 399..656 CDD:270802 92/261 (35%)
Blue background indicates that the domain is not in the aligned region.

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