DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pak and YDA

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001319310.1 Gene:YDA / 842674 AraportID:AT1G63700 Length:883 Species:Arabidopsis thaliana


Alignment Length:657 Identity:171/657 - (26%)
Similarity:276/657 - (42%) Gaps:94/657 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 FVGHTVSSSTSQHSSANEDDMLGPQH-----PQQQPPPPPVASRPERTKSIYTRPIEDLQPAI-I 310
            |.....||..|:.|....|:::..:.     |.:.|.|   ::|..|.:|...|     .||: :
plant    29 FASEDRSSGRSRKSRRRRDEIVSERGAISRLPSRSPSP---STRVSRCQSFAER-----SPAVPL 85

  Fly   311 PMP-VAPATTPATPLQNHRTPGGISA---PAASPMMHNNATTTLDKNKNNATPTSPTTTKTTAET 371
            |.| |.|..|......|.....|:.|   |:..|:...:..|::..| ..|.|...|.:.::..:
plant    86 PRPIVRPHVTSTDSGMNGSQRPGLDANLKPSWLPLPKPHGATSIPDN-TGAEPDFATASVSSGSS 149

  Fly   372 EGTDATSTLLSATNPSC---STTPTT------------------DPAP-------AAPRGSLVET 408
            .|...:.:|||.....|   :.||..                  .|.|       |:||...:.|
plant   150 VGDIPSDSLLSPLASDCENGNRTPVNISSRDQSMHSNKNSAEMFKPVPNKNRILSASPRRRPLGT 214

  Fly   409 ATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHA------------LPTIHCPTPTS 461
            ...:.......:...:..:...|:.|.|...||..|..::|.            |.:..|.:|.|
plant   215 HVKNLQIPQRDLVLCSAPDSLLSSPSRSPMRSFIPDQVSNHGLLISKPYSDVSLLGSGQCSSPGS 279

  Fly   462 --SSRNSTVSFPVAVPL-----------PPIVTP--ASPTPASIESPDLYTP-EPTVAQVSAGGP 510
              :|.|:::...:|..|           .|:.:|  .||.|:|.......|| .|.....:.|.|
plant   280 GYNSGNNSIGGDMATQLFWPQSRCSPECSPVPSPRMTSPGPSSRIQSGAVTPLHPRAGGSTTGSP 344

  Fly   511 SSQVAGNQIAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQG 575
            :.::..|:....:..:.|....||...:......:...:........:...|..::.|...:|.|
plant   345 TRRLDDNRQQSHRLPLPPLLISNTCPFSPTYSAATSPSVPRSPARAEATVSPGSRWKKGRLLGMG 409

  Fly   576 ASGTVYTAIESSTGMEVAIKQMNL-SQQPKK----ELIINEILVMRENKHPNVVNYLDSYLVSEE 635
            :.|.||....|.:|...|:|::.| |..||.    :.:..||.|:...:|.|:|.|..|..|.::
plant   410 SFGHVYLGFNSESGEMCAMKEVTLCSDDPKSRESAQQLGQEISVLSRLRHQNIVQYYGSETVDDK 474

  Fly   636 LWVVMEYLPGGSLTDVVTE-TCMDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSV 699
            |::.:||:.|||:..::.| ....|..|....:::|..|.:|||...:|||||..|||:...|.|
plant   475 LYIYLEYVSGGSIYKLLQEYGQFGENAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPHGRV 539

  Fly   700 KLTDFGFCAQISPEQSKRTTMVGTPYWMAPEVVTRKQYGPK--VDLWSLGIMAIEMVEGEPPYLN 762
            |:.|||....|: .||...:..|:||||||||: :...|..  ||:||||...:||...:||:..
plant   540 KVADFGMAKHIT-AQSGPLSFKGSPYWMAPEVI-KNSNGSNLAVDIWSLGCTVLEMATTKPPWSQ 602

  Fly   763 ENPLKALYLIATNGK--PEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPFLK----LAR 821
            ...:.|::.|. |.|  |:|  .|.||...:||:.:||:.....|.:|..||.|.|::    :.|
plant   603 YEGVPAMFKIG-NSKELPDI--PDHLSEEGKDFVRKCLQRNPANRPTAAQLLDHAFVRNVMPMER 664

  Fly   822 PLASLTP 828
            |:.|..|
plant   665 PIVSGEP 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166
STKc_PAK_I 558..818 CDD:270814 94/269 (35%)
S_TKc 566..817 CDD:214567 92/260 (35%)
YDANP_001319310.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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