DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and PERK12

DIOPT Version :10

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_173768.2 Gene:PERK12 / 838963 AraportID:AT1G23540 Length:720 Species:Arabidopsis thaliana


Alignment Length:591 Identity:130/591 - (21%)
Similarity:212/591 - (35%) Gaps:141/591 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 SSST---SQHSSANEDDMLGP----QHPQQQPPPPPVASRPERTKSIYTRPIEDLQPAIIPMPVA 315
            ||||   |:.|:...|..|.|    ..|....||||..|.|                   |:...
plant    46 SSSTPPLSEPSTPPPDSQLPPLPSILPPLTDSPPPPSDSSP-------------------PVDST 91

  Fly   316 PATTPATPLQNHRTPGGISAPAASPMMHNNATTTLDKNKNNATPTSPT-----TTKTTAETEGTD 375
            |:..|.|..::...|.....|.|.|...|:......::..:..|:||:     |...:...:...
plant    92 PSPPPPTSNESPSPPEDSETPPAPPNESNDNNPPPSQDLQSPPPSSPSPNVGPTNPESPPLQSPP 156

  Fly   376 ATSTLLSATNPSCSTTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTTNHHSSASSFSSFPS 440
            |........:|..|....|:|.|..|.|.                |||...|.::..|.|.:.|.
plant   157 APPASDPTNSPPASPLDPTNPPPIQPSGP----------------ATSPPANPNAPPSPFPTVPP 205

  Fly   441 FHDDDGTHHALPTIHCP---TPTSSSRN------------------STVSFPVAVPLPPIVTPAS 484
            .....|. ...|::..|   |||.:..|                  :...|.:...:..:.....
plant   206 KTPSSGP-VVSPSLTSPSKGTPTPNQGNGDGGGGGGGYQGKTMVGMAVAGFAIMALIGVVFLVRR 269

  Fly   485 PTPASIES--PDLYTPEPTVAQVSAG-------------GPSSQV----------AGNQIAV--- 521
            ....:|:|  ...|.|.|..:..|.|             ||:..:          .||....   
plant   270 KKKRNIDSYNHSQYLPHPNFSVKSDGFLYGQDPGKGYSSGPNGSMYNNSQQQQSSMGNSYGTAGG 334

  Fly   522 --PQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASGTVYTAI 584
              |...:..:.||::....:.:...|.||:.|     ::.|     :.:...:|:|..|.||.. 
plant   335 GYPHHQMQSSGTPDSAILGSGQTHFSYEELAE-----ITQG-----FARKNILGEGGFGCVYKG- 388

  Fly   585 ESSTGMEVAIKQMNL-SQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEE-LWVVMEYLPGGS 647
            ....|..||:||:.. |.|..:|... |:.::....|.::|: |..|.:|:: ..::.||:...:
plant   389 TLQDGKVVAVKQLKAGSGQGDREFKA-EVEIISRVHHRHLVS-LVGYCISDQHRLLIYEYVSNQT 451

  Fly   648 LTDVVTETCMDEGQIAAVCREVLQ-------------ALEFLHAN---QVIHRDIKSDNILLGLD 696
            |          |..:......||:             .|.:||.:   ::|||||||.||||..:
plant   452 L----------EHHLHGKGLPVLEWSKRVRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILLDDE 506

  Fly   697 GSVKLTDFGFCAQISPEQSKRTTMV-GTPYWMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPY 760
            ...::.|||........|:..:|.| ||..::|||..:..:...:.|::|.|::.:|:|.|..|.
plant   507 YEAQVADFGLARLNDTTQTHVSTRVMGTFGYLAPEYASSGKLTDRSDVFSFGVVLLELVTGRKPV 571

  Fly   761 LNENPL 766
            ....||
plant   572 DQTQPL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..139 CDD:395634
STKc_PAK_I 558..818 CDD:270814 60/228 (26%)
PERK12NP_173768.2 STKc_IRAK 377..645 CDD:270968 59/214 (28%)
Blue background indicates that the domain is not in the aligned region.

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