DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and AT4G24100

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001328320.1 Gene:AT4G24100 / 828510 AraportID:AT4G24100 Length:725 Species:Arabidopsis thaliana


Alignment Length:284 Identity:106/284 - (37%)
Similarity:146/284 - (51%) Gaps:18/284 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   564 RKYTKMEKIGQGASGTVYTAIESSTGMEVAIKQMNLSQ-QPKKELIINEILVMRENKHPNVVNYL 627
            :.|..||:||.|||..||.||...|...||||.::|.: ....:.|..|...|....||||:...
plant    47 KDYKLMEEIGHGASAVVYRAIYLPTNEVVAIKCLDLDRCNSNLDDIRRESQTMSLIDHPNVIKSF 111

  Fly   628 DSYLVSEELWVVMEYLPGGSLTDVVTETCMD---EGQIAAVCREVLQALEFLHANQVIHRDIKSD 689
            .|:.|...|||||.::..||...::.....|   |..|..|.:|.|:||::||....||||:|:.
plant   112 CSFSVDHSLWVVMPFMAQGSCLHLMKTAYSDGFEESAICCVLKETLKALDYLHRQGHIHRDVKAG 176

  Fly   690 NILLGLDGSVKLTDFGFCAQI---SPEQSKRTTMVGTPYWMAPEVV-TRKQYGPKVDLWSLGIMA 750
            ||||..:|.:||.|||..|.:   ...|..|.|.||||.||||||: ....|..|.|:||.||.|
plant   177 NILLDDNGEIKLGDFGVSACLFDNGDRQRARNTFVGTPCWMAPEVLQPGNGYNSKADIWSFGITA 241

  Fly   751 IEMVEGEPPYLNENPLKALYLIATNGKPEIK-EKD-KLSSAFQDFLDQCLEVEVDRRASALDLLK 813
            :|:..|..|:....|:|.|.:...|..|.:. ::| |.|.:|::.:..||..:..:|.:|..|||
plant   242 LELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPTAEKLLK 306

  Fly   814 HPFLKLARP--------LASLTPL 829
            |...|..:|        .:.|.||
plant   307 HSCFKHTKPPEQTVKILFSDLPPL 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166
STKc_PAK_I 558..818 CDD:270814 101/263 (38%)
S_TKc 566..817 CDD:214567 101/260 (39%)
AT4G24100NP_001328320.1 STKc_OSR1_SPAK 47..310 CDD:270787 101/262 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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