DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and pak6b

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001155959.1 Gene:pak6b / 567874 ZFINID:ZDB-GENE-041014-121 Length:607 Species:Danio rerio


Alignment Length:801 Identity:238/801 - (29%)
Similarity:344/801 - (42%) Gaps:224/801 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RKKKTLKSKIKGSKPSHTDSKPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQE 124
            ||||  |.|::            ||.|.||:|.||..||.|.|.|.|:|..|..|:        |
Zfish     5 RKKK--KRKLE------------ISTPKNFQHRVHTSFDPVQGCFIGLPPQWQSLI--------E 47

  Fly   125 QKKNPQAVLDVLKWFDNTTKQRPSSKYMTNAITTHSG------SSLSRVSSSSPSSTPTDSELHG 183
            ..|.|:.|:|...:  ...:.||....:..:...|..      :.:||:|.:|            
Zfish    48 TLKRPKPVVDPSSF--TQVQVRPQKSIVRGSFIGHEDYISAAIAQMSRLSVTS------------ 98

  Fly   184 SNSGGNLIGVQLGSMTLGPNANNVAVAGQILGNHYQQQQQHLLQQQQPLLHQNHNQHHMGISQSH 248
            |||      ::..|.::...|.::...|::     .:.:.:..::.....|:|.:..|.|.... 
Zfish    99 SNS------LRRRSPSVRKRAQSLGRLGEL-----AEAETYEYEELNNTNHRNSSDLHRGSRPI- 151

  Fly   249 SYNFVGHTVSSSTSQHSSANEDDMLGPQHPQQQPPPPPVASRPERTKSIYTRPIEDLQPAIIPMP 313
                                       |.||.:....|..:|.....:::|        .::|..
Zfish   152 ---------------------------QSPQTESRQSPARARSVHEATMFT--------GLMPRD 181

  Fly   314 VAPATTPATPLQNHRTPGGISAPAASPMMHNNATTTLDK--NKNNATPTSPTTTKTTA------- 369
            :                          ::|.......|.  ||.|..|.|...:::..       
Zfish   182 I--------------------------LLHRAGCEGTDNAGNKPNQRPVSCLYSQSDGAKLNSDQ 220

  Fly   370 ---ETEGTDATSTLLSATNPSCSTTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTTNHHSS 431
               ||:....::......:|:.       ||.:.|.|                  ||:....|. 
Zfish   221 LKMETQRRPQSTYDFKVNSPNL-------PAASKPNG------------------TSSPKPGHG- 259

  Fly   432 ASSFSSFPSFHDDDGTHHALPTIHCPTPTSSSRNSTV---SFPVAVPLPPIVTPASP--TPASIE 491
                                 .|...||..||.::|:   :.|..|| |...:|:.|  .|:...
Zfish   260 ---------------------IISMQTPRRSSTDNTLKLSTIPADVP-PAQDSPSEPRQAPSGAS 302

  Fly   492 SPDLYTPEPTVAQVSAGGPSSQVAGNQIAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTI 556
            ||.|..|..|..|.                             |||               |:.:
Zfish   303 SPGLTEPSVTHTQF-----------------------------RAA---------------LQMV 323

  Fly   557 VSVGDPNRKYTKMEKIGQGASGTVYTAIESSTGMEVAIKQMNLSQQPKKELIINEILVMRENKHP 621
            |..|||........|||:|::|.|..|.|..:|.:||:|.|:|.:|.::||:.||:::||:.:|.
Zfish   324 VDPGDPRSYLENFIKIGEGSTGVVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYRHQ 388

  Fly   622 NVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETCMDEGQIAAVCREVLQALEFLHANQVIHRDI 686
            |||....|.||.|||||:||||.||:||::|:||.:.|.|||.||..|||||.:||:..||||||
Zfish   389 NVVEMYKSALVGEELWVIMEYLQGGALTNIVSETRLTEEQIATVCESVLQALCYLHSQGVIHRDI 453

  Fly   687 KSDNILLGLDGSVKLTDFGFCAQISPEQSKRTTMVGTPYWMAPEVVTRKQYGPKVDLWSLGIMAI 751
            |||:|||.|||.|||:|||||||||.:..||.::||||||||||||::..||.:||:||||||.:
Zfish   454 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRRSLVGTPYWMAPEVVSKTPYGTEVDIWSLGIMVV 518

  Fly   752 EMVEGEPPYLNENPLKALYLIATNGKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPF 816
            |||:|||||.:|.|:.|:..:.....|..:...|:|...:||||..|..|..:|:||.|||:|||
Zfish   519 EMVDGEPPYFSETPISAMKRLRDEPPPTARNASKISPVLRDFLDSMLTREPQQRSSASDLLQHPF 583

  Fly   817 LKLARPLASLTPLIMAAKEAT 837
            |........|.||:...:..|
Zfish   584 LLQCSSPRCLIPLVEQTRRRT 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166 22/53 (42%)
STKc_PAK_I 558..818 CDD:270814 140/259 (54%)
S_TKc 566..817 CDD:214567 136/250 (54%)
pak6bNP_001155959.1 PBD 13..65 CDD:279166 22/73 (30%)
STKc_PAK6 311..607 CDD:270821 152/338 (45%)
S_TKc 338..584 CDD:214567 136/245 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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