DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and map3k3

DIOPT Version :10

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_688694.2 Gene:map3k3 / 560211 ZFINID:ZDB-GENE-070910-1 Length:620 Species:Danio rerio


Alignment Length:661 Identity:159/661 - (24%)
Similarity:262/661 - (39%) Gaps:167/661 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 DMLGPQHPQQQP----------PPPPVASR-------------PERTKSIYTRPI--EDLQPAII 310
            |::..|..::||          |..|.:|.             .||...::.||:  |::|..: 
Zfish    13 DLVALQMTRRQPTTTYDTAKTKPVIPASSSNRLEDVRIKFEFCGERRILMFGRPVQFEEVQQKV- 76

  Fly   311 PMPVAPATTPATPLQNHRTPGGISAPAASPMMHNNATTTLDKNKN--------------NATPTS 361
                  .|.....|..|.....:|.|.......:.|...||::.|              ||:.:|
Zfish    77 ------KTFFGQQLDLHYMNNELSIPLRDQDDLDKAIDLLDRSSNMKSIKIMLLTQEQSNASSSS 135

  Fly   362 PTTTKTTAETEGTDATSTLLSATNPSCSTTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTT 426
            ..|.......:.:.:|..:.:|...|            .|||      ..|:|::..|..:|...
Zfish   136 HHTVCKQVRIKTSQSTGDVSTAYQSS------------EPRG------RHHSTSSQNTGRSSPPP 182

  Fly   427 NH----------HSSASSFSSFPSFHDDDGTHHALPTIHCPTPTSSSRNSTVSFPVAVPLPPIVT 481
            .:          ..|.:|.:|...|..:......|      .|.||:.||               
Zfish   183 GYVPERQQRIARQGSYTSINSEGEFIPETSDQCVL------DPWSSAENS--------------- 226

  Fly   482 PASPTPASIESPDLYTPEPTVAQ---------------------------VSAGGP--------- 510
                ...|.:|.|..:..|::.:                           |..||.         
Zfish   227 ----VSGSCQSLDSNSDSPSLRKSRTHRIKSYPDNRQDCSDRENHVYDKIVGKGGTYPRRYHVSM 287

  Fly   511 --SSQVAGN----QIAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGD---PNRKY 566
              .....|.    :|..||..:. ...|:.|:.|..::.:...: ||..::.:...|   |::..
Zfish   288 HHKDHSEGRRTFPRIRRPQGNLF-TLVPSRRSLNGSEESLGSWQ-LENTQSRLRPQDRAVPHKSP 350

  Fly   567 T------KMEKIGQGASGTVYTAIESSTGMEVAIKQMNL---SQQPKKEL--IINEILVMRENKH 620
            |      :.:.:||||.|.||...:..||.|:|.||::.   |.:..||:  :..||.:::...|
Zfish   351 TAPVTWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVHFDPASPETSKEVSALECEIQLLKNLHH 415

  Fly   621 PNVVNYLDSYLVSEE--LWVVMEYLPGGSLTD-VVTETCMDEGQIAAVCREVLQALEFLHANQVI 682
            ..:|.|........|  |.:.|||:||||:.| :.....:.|.......|::|:.:.:||:|.::
Zfish   416 ERIVQYYGCLRDHNEKTLTIFMEYMPGGSVKDQLKAYGALTENVTRKYTRQILEGMSYLHSNMIV 480

  Fly   683 HRDIKSDNILLGLDGSVKLTDFGFCAQISPEQSKRT---TMVGTPYWMAPEVVTRKQYGPKVDLW 744
            |||||..|||....|:|||.|||...::.......|   ::.||||||:|||::.:.||.|.|:|
Zfish   481 HRDIKGANILRDSAGNVKLGDFGASKRLQTICMSSTGVRSVTGTPYWMSPEVISGEGYGRKADVW 545

  Fly   745 SLGIMAIEMVEGEPPYLNENPLKALYLIATN-GKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASA 808
            |||...:||:..:||:.....:.|::.|||. ..|::  ...:|...:||| :|:.||...|.||
Zfish   546 SLGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQL--PSHISEHTRDFL-RCIFVEAKYRPSA 607

  Fly   809 LDLLKHPFLKL 819
            .:||:|||.::
Zfish   608 EELLRHPFSQI 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..139 CDD:395634
STKc_PAK_I 558..818 CDD:270814 97/280 (35%)
map3k3XP_688694.2 PB1_Mekk2_3 48..126 CDD:99726 15/84 (18%)
STKc_MEKK3_like 356..615 CDD:270795 92/261 (35%)
Blue background indicates that the domain is not in the aligned region.

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