DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and map4k3a

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:XP_009304401.1 Gene:map4k3a / 558281 ZFINID:ZDB-GENE-130329-1 Length:946 Species:Danio rerio


Alignment Length:286 Identity:116/286 - (40%)
Similarity:169/286 - (59%) Gaps:12/286 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   561 DPNRKYTKMEKIGQGASGTVYTAIESSTGMEVAIKQMNLSQQPKKELIINEILVMRENKHPNVVN 625
            :|...:..:::||.|..|.||.|...:||...|||.:.|.......::..||::|::.||.|:|.
Zfish    11 NPQEDFELIQRIGSGTYGDVYKARNVTTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVA 75

  Fly   626 YLDSYLVSEELWVVMEYLPGGSLTDVVTET-CMDEGQIAAVCREVLQALEFLHANQVIHRDIKSD 689
            |..|||..::||:.|||..||||.|:...| .:.|.|||.|.||.||.|.:||....:|||||..
Zfish    76 YFGSYLRRDKLWISMEYCGGGSLQDIYHVTGPLTESQIAYVTRETLQGLYYLHNKGKMHRDIKGA 140

  Fly   690 NILLGLDGSVKLTDFGFCAQISPEQSKRTTMVGTPYWMAPEV--VTRK-QYGPKVDLWSLGIMAI 751
            ||||..:|.|||.|||..|||:...:||.:.:||||||||||  |.|| .|....|:|::||.||
Zfish   141 NILLTDNGYVKLADFGVSAQITATLAKRKSFIGTPYWMAPEVAAVERKGGYNHLCDIWAVGITAI 205

  Fly   752 EMVEGEPPYLNENPLKALYLIATNG--KPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKH 814
            |:.|.:||..:.:|::||:|:..:.  .|::|:|.|.::.|.:|:...|.....:|..|..||:|
Zfish   206 ELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKVKWTNNFHNFVKLALTKNPKKRPPADKLLQH 270

  Fly   815 PFLKLARPLASLTPLIMAAKEATKGN 840
            |.  :::||:.    |:|.:...|.|
Zfish   271 PL--VSQPLSR----ILAIELLDKAN 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166
STKc_PAK_I 558..818 CDD:270814 110/262 (42%)
S_TKc 566..817 CDD:214567 109/256 (43%)
map4k3aXP_009304401.1 STKc_MAP4K3_like 15..273 CDD:270788 109/259 (42%)
S_TKc 16..273 CDD:214567 109/258 (42%)
CNH 614..926 CDD:214481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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