DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and Pak3

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001262638.1 Gene:Pak3 / 41995 FlyBaseID:FBgn0044826 Length:583 Species:Drosophila melanogaster


Alignment Length:780 Identity:254/780 - (32%)
Similarity:346/780 - (44%) Gaps:253/780 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 ISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQEQKKNPQAVLDVLKWFDNTTKQRP 147
            |..||||:...||..:..||:..|:|..|.| ||||.|::.||.|||.|....:|:::.:.|::.
  Fly    20 IGAPTNFQRHFHVSRNQETGDLEGLPAPWVR-LMNSQITRDEQDKNPDAAYHAVKYYNYSIKKKE 83

  Fly   148 S---------------SKYMTNAI---TTHSGSSLSRVSSSSPSSTPTDSELHGSNSG-GNLIGV 193
            :               ||.:.|.:   ..|......: |....|||.|::|   |:|| |:..| 
  Fly    84 NEVFKPFITEDVIHEESKEIENYVNYKNKHKSQDPEK-SDDDGSSTATETE---SSSGCGSSAG- 143

  Fly   194 QLGSMTLGPNANNVAVAGQILGNHYQQQQQHLLQQQQPLLHQ-NHNQHHMGISQSHSYNFVGHTV 257
                     |:|:.::      |...||....|...:.:..: ..|..|.            .|:
  Fly   144 ---------NSNSSSI------NDSSQQSTVPLDALEEVFKELKTNLEHR------------ETL 181

  Fly   258 SSSTSQHSSANEDDMLGPQHPQQQPPPPPVASRPERTKSIYTRPIEDLQPAIIPMPVAPATTPAT 322
            .::                 ||:.||.||       .||.:|.|   .:|.|.|.|         
  Fly   182 KAA-----------------PQEPPPVPP-------KKSPHTIP---PKPQIKPKP--------- 210

  Fly   323 PLQNHRTPGGISAPAASPMMHNNATTTLDKNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPS 387
                                                                             
  Fly   211 ----------------------------------------------------------------- 210

  Fly   388 CSTTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHALP 452
                                                ..|...|..|....    .:|....|.:.
  Fly   211 ------------------------------------RVTQKFSRTSDIRR----DEDSDNQHKIN 235

  Fly   453 TIHCPTPTSSSRNSTVSFPVAVPLPPIVTPASPTPASIESPDLYTPEPTVAQVSAGGPSSQVAGN 517
            |                                        |....:|.|....||...:     
  Fly   236 T----------------------------------------DTIIIKPAVGAQDAGADDN----- 255

  Fly   518 QIAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASGTVYT 582
                |...:       .|.:..|:.:.:|.||..:||.|.:..||..:|...:::|:||||.|:.
  Fly   256 ----PDETI-------LRRSKEKRAQKTDAEIYVELRAICNSDDPRERYKTTQEVGKGASGIVFI 309

  Fly   583 AIESSTGMEVAIKQMNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLV--SEELWVVMEYLPG 645
            |.:.....:||:|.:::..|..|:||:.||.|:::..|.|:||:||:||:  .::|||||||:.|
  Fly   310 AADLQNESQVAVKTIDMKNQSSKDLILTEIRVLKDFNHKNLVNFLDAYLLEPEDQLWVVMEYMDG 374

  Fly   646 GSLTDVVTETCMDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDFGFCAQI 710
            |.||||||||.|.|.|||.||||.|.|:.||||..:|||||||||:|||:|||||:|||||||.|
  Fly   375 GPLTDVVTETVMKERQIACVCRETLYAISFLHAKGIIHRDIKSDNVLLGMDGSVKVTDFGFCANI 439

  Fly   711 SPEQSKRTTMVGTPYWMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLIATN 775
            ..:: ||.|||||||||||||||||:||.|||:||:|||||||:||:||||.|.||:||||||.|
  Fly   440 EGDE-KRQTMVGTPYWMAPEVVTRKKYGKKVDIWSIGIMAIEMIEGQPPYLYETPLRALYLIAAN 503

  Fly   776 GKPEIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLIMAAKEATKGN 840
            |:|:||..||||...|||||:||:|||||||:|.:||.||||.....:.:|.|.|.|||:..:.|
  Fly   504 GRPDIKSWDKLSPNLQDFLDRCLQVEVDRRATADELLSHPFLNDCSEVKALVPNIKAAKKVLRRN 568

  Fly   841  840
              Fly   569  568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166 24/53 (45%)
STKc_PAK_I 558..818 CDD:270814 162/261 (62%)
S_TKc 566..817 CDD:214567 159/252 (63%)
Pak3NP_001262638.1 PBD 19..73 CDD:279166 24/53 (45%)
PKc_like 288..545 CDD:304357 161/257 (63%)
S_TKc 293..545 CDD:214567 159/252 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1808
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D32574at7147
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - P PTHR48015
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.970

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