DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and Pak6

DIOPT Version :10

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001099968.1 Gene:Pak6 / 296078 RGDID:1306213 Length:681 Species:Rattus norvegicus


Alignment Length:827 Identity:261/827 - (31%)
Similarity:368/827 - (44%) Gaps:200/827 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RKKKTLKSKIKGSKPSHTDSKPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQE 124
            ||||              ..:|.||.|.||:|.||..||...|:|.|:|..|             
  Rat     3 RKKK--------------KKRPEISAPQNFQHRVHTSFDPKEGKFVGLPPQW------------- 40

  Fly   125 QKKNPQAVLDVLKWFDNTTKQRPSSKYMTNAITTHSGSSLSRVSSSSPSSTPTDSELHGSNSGGN 189
                 |.:||.|:        ||......:.||......:..|...  ||.||:..:     .|.
  Rat    41 -----QNILDTLR--------RPKPVVDPSRITRVQLQPMKTVVRG--SSVPTEGYI-----SGL 85

  Fly   190 LIGVQ----LGSMTL---GPNANNVAVAGQILG-NHYQQQQQHLLQQQQPLLHQNHNQH---HMG 243
            |..:|    :.|.||   .|.:...|.:..:|| :.:.......||..|......|..:   :.|
  Rat    86 LNDIQKLSAISSNTLRGRSPTSRRRAQSLGLLGDDQWAADPDMYLQSPQSERTDPHGVYLSCNGG 150

  Fly   244 ISQSHSYNFVGHTVSSSTSQHSSANEDDMLGPQHPQ-------------QQPPP---PPVAS--- 289
            ....|.........|.....:..|.:...|||...|             |..||   ||:|:   
  Rat   151 TPAGHRQTPWPEPQSPQALPNGMAAKAQSLGPAEFQGASQRCLQLGACLQSSPPGTSPPMATGRR 215

  Fly   290 --RPERTKSIYTRPIEDLQPAIIPMP-----VAPATTPATPLQNHR--------TPGGISAPAAS 339
              :..:..|...||...|..:.|..|     .:|.|..::  ..||        ||...||.::.
  Rat   216 GVKVTKHSSEEARPQSCLVGSAIGRPGGEGSPSPKTQESS--LKHRLFRSMFLSTPATGSASSSK 278

  Fly   340 PMMHNNATTTLDKNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPSCSTTPTTDPAPAAPRGS 404
            |:       .|.:||.|:....|.          .|::|.|::......|..||           
  Rat   279 PV-------PLPQNKLNSAFRPPQ----------KDSSSNLVAKAQSLPSDQPT----------- 315

  Fly   405 LVETATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHALPTIHCPTPTSSSRNSTVS 469
                                                     ||...|.|    :.|||.:.|..:
  Rat   316 -----------------------------------------GTFSPLTT----SDTSSPQKSLRT 335

  Fly   470 FPVAVPLPPIVTPA-SPTP--ASIESPDLYTP-EPTVAQVSAGGPSSQVAGNQIAVPQAAVAPAA 530
            .|...|||...:|| ||..  |.|.:.:||.| :||||:.:.||..:.:                
  Rat   336 APATGPLPGRSSPAGSPRTRHAQISTSNLYLPQDPTVAKGALGGEDTGI---------------- 384

  Fly   531 TPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASGTVYTAIESSTGMEVAIK 595
                         ::.|:....||.:|..|||........|||:|::|.|..|.|..:|.:||:|
  Rat   385 -------------VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVK 436

  Fly   596 QMNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETCMDEG 660
            .|:|.:|.::||:.||:::||:.:|.|||....||||.|||||:||:|.||:|||::::..::|.
  Rat   437 MMDLRKQQRRELLFNEVVIMRDYQHLNVVEMYKSYLVGEELWVLMEFLQGGALTDIISQVRLNEE 501

  Fly   661 QIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDFGFCAQISPEQSKRTTMVGTPY 725
            |||.||..|||||.:|||..|||||||||:|||.|||.|||:|||||||||.:..||.::|||||
  Rat   502 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPY 566

  Fly   726 WMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLIATNGKPEIKEKDKLSSAF 790
            ||||||::|..|..:||:||||||.||||:|||||.:::|::|:..:..:..|::|...|:|...
  Rat   567 WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSYKVSPVL 631

  Fly   791 QDFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLIMAAKEAT 837
            :|||::.|..|...||:|.:||.||||........|.|||...::.|
  Rat   632 RDFLERMLVREPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQT 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..139 CDD:395634 19/55 (35%)
STKc_PAK_I 558..818 CDD:270814 137/259 (53%)
Pak6NP_001099968.1 PBD 11..67 CDD:395634 23/81 (28%)
STKc_PAK6 385..681 CDD:270821 147/294 (50%)

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