DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pak and Pak1

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_058894.1 Gene:Pak1 / 29431 RGDID:3250 Length:544 Species:Rattus norvegicus


Alignment Length:842 Identity:375/842 - (44%)
Similarity:435/842 - (51%) Gaps:313/842 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EDKPPAPPVRLTSNRGGNERSGGGVGVGG---GGLGGGGMGDVPPDMRPLPKEPDDSDRKKKTLK 66
            :|||||||:|.||..         :|.|.   |.|..|.        :|||..|::..:|.:..:
  Rat     9 QDKPPAPPMRNTSTM---------IGAGSKDPGTLNHGS--------KPLPPNPEEKKKKDRFYR 56

  Fly    67 SKIKGSKPSHTDSK--PNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQEQKKNP 129
            |.:.|.|.:....|  |.||.|::||||:||||||||||||||||.|||||..|||:|.||||||
  Rat    57 SILAGDKTNKKKEKERPEISLPSDFEHTIHVGFDAVTGEFTGMPEQWARLLQTSNITKSEQKKNP 121

  Fly   130 QAVLDVLKWFDNTTKQRPSSKYMTNAITTHSGSSLSRVSSSSPSSTPTDSELHGSNSGGNLIGVQ 194
            |||||||::: |:.|...|.|||:.                      ||......||...|    
  Rat   122 QAVLDVLEFY-NSKKTSNSQKYMSF----------------------TDKSAEDYNSSNTL---- 159

  Fly   195 LGSMTLGPNANNVAVAGQILGNHYQQQQQHLLQQQQPLLHQNHNQHHMGISQSHSYNFVGHTVSS 259
                       ||                                               .|||.
  Rat   160 -----------NV-----------------------------------------------KTVSE 166

  Fly   260 STS-QHSSANEDDMLGPQHPQQQPPPPPVASRPERTKSIYTRPIEDLQPAIIPMPVAPATTPATP 323
            :.: ...|.:|||      .....|||.:|.|||.|||:|||.:      |.|:||         
  Rat   167 TPAVPPVSEDEDD------DDDATPPPVIAPRPEHTKSVYTRSV------IEPLPV--------- 210

  Fly   324 LQNHRTPGGISAPAASPMMHNNATTTLDKNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPSC 388
                                                                             
  Rat   211 ----------------------------------------------------------------- 210

  Fly   389 STTPTTDPAPAAPRGSLVETATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHALPT 453
              |||.|                        ||||                              
  Rat   211 --TPTRD------------------------VATS------------------------------ 219

  Fly   454 IHCPTPTSSSRNSTVSFPVAVPLPPIVTPASPTPASIESPDLYTPEPTVAQVSAGGPSSQVAGNQ 518
                                        |.|||..:...||                        
  Rat   220 ----------------------------PISPTENNTTPPD------------------------ 232

  Fly   519 IAVPQAAVAPAATPNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASGTVYTA 583
                      |.|.||. ...||.||||||||||||:|||||||.:|||:.||||||||||||||
  Rat   233 ----------ALTRNTE-KQKKKPKMSDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTA 286

  Fly   584 IESSTGMEVAIKQMNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSL 648
            ::.:||.|||||||||.|||||||||||||||||||:||:|||||||||.:|||||||||.||||
  Rat   287 MDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 351

  Fly   649 TDVVTETCMDEGQIAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDFGFCAQISPE 713
            ||||||||||||||||||||.||||||||:||||||||||||||||:|||||||||||||||:||
  Rat   352 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 416

  Fly   714 QSKRTTMVGTPYWMAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLIATNGKP 778
            ||||:|||||||||||||||||.||||||:||||||||||:||||||||||||:|||||||||.|
  Rat   417 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 481

  Fly   779 EIKEKDKLSSAFQDFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLIMAAKEATKGN 840
            |::..:|||:.|:|||::|||::|::|.||.:||:|.|||:|:||:||||||.|||||||.|
  Rat   482 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEATKNN 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166 44/53 (83%)
STKc_PAK_I 558..818 CDD:270814 215/259 (83%)
S_TKc 566..817 CDD:214567 208/250 (83%)
Pak1NP_058894.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..79 27/86 (31%)
Autoregulatory region 70..140 49/70 (70%)
GTPase-binding 70..105 26/34 (76%)
PBD 74..132 CDD:395634 45/58 (78%)
Interaction with CRIPAK. /evidence=ECO:0000250 132..269 76/425 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..195 18/112 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..250 25/233 (11%)
STKc_PAK1 248..543 CDD:270820 245/294 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343815
Domainoid 1 1.000 443 1.000 Domainoid score I513
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1936
Inparanoid 1 1.050 668 1.000 Inparanoid score I711
OMA 1 1.010 - - QHG52925
OrthoDB 1 1.010 - - D425477at33208
OrthoFinder 1 1.000 - - FOG0000763
OrthoInspector 1 1.000 - - otm46435
orthoMCL 1 0.900 - - OOG6_100484
Panther 1 1.100 - - LDO PTHR48015
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X799
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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