DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pak and Pak6

DIOPT Version :9

Sequence 1:NP_001138013.2 Gene:Pak / 44039 FlyBaseID:FBgn0267698 Length:840 Species:Drosophila melanogaster
Sequence 2:NP_001028426.2 Gene:Pak6 / 214230 MGIID:2679420 Length:682 Species:Mus musculus


Alignment Length:826 Identity:260/826 - (31%)
Similarity:368/826 - (44%) Gaps:197/826 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 RKKKTLKSKIKGSKPSHTDSKPNISYPTNFEHTVHVGFDAVTGEFTGMPEAWARLLMNSNISKQE 124
            ||||              ..:|.||.|.||:|.||..||...|:|.|:|..|             
Mouse     3 RKKK--------------KKRPEISAPQNFQHRVHTSFDPKEGKFVGLPPQW------------- 40

  Fly   125 QKKNPQAVLDVLKWFDNTTKQRPSSKYMTNAITTHSGSSLSRVSSSSPSSTPTDSELHGSNSGGN 189
                 |.:||.|:        ||......:.||......:..|...  ||.||:..:.|..:...
Mouse    41 -----QNILDTLR--------RPKPVVDPSRITRVQLQPMKTVVRG--SSVPTEGYISGLLNDIQ 90

  Fly   190 LIGVQLGSMTL---GPNANNVAVAGQILG-NHYQQQQQHLLQQQQPLLHQNHNQHHMGISQSHSY 250
            .:.| :.|.||   .|.:...|.:..:|| :.:.......||..|    ..|...|......:..
Mouse    91 KLSV-ISSNTLRGRSPTSRRRAQSLGLLGDDQWAADPDMYLQSPQ----SEHTDPHGLYLSCNGG 150

  Fly   251 NFVGH-------TVSSSTSQHSSANEDDMLGPQHPQ--------------QQPPP---PPVAS-- 289
            ...||       ..|.....:..|.:...|||...|              |..||   ||:|:  
Mouse   151 TPAGHRQVPWPEPQSPQALPNGMAAKAQSLGPAEFQGASQRCLQQLGACLQSSPPGTSPPMATGR 215

  Fly   290 ---RPERTKSIYTRPIEDLQPAIIPMP---VAPATTPATPLQNHR--------TPGGISAPAASP 340
               :..:..|...||...|..:.|..|   .:|:.........||        ||...:|.::.|
Mouse   216 RGVKVAKHSSEEARPQSCLVGSAIGRPGGEGSPSPKNQESSLKHRLFRSMFLSTPATGAASSSKP 280

  Fly   341 MMHNNATTTLDKNKNNATPTSPTTTKTTAETEGTDATSTLLSATNPSCSTTPTTDPAPAAPRGSL 405
            :       .|.:||.|:....|.          .|::|.|::    ...:.|:..|.        
Mouse   281 V-------PLPQNKPNSAFRPPQ----------KDSSSNLVA----KAQSLPSEQPM-------- 316

  Fly   406 VETATAHATTAAATVATSTTTNHHSSASSFSSFPSFHDDDGTHHALPTIHCPTPTSSSRNSTVSF 470
                                                    ||...|.|    :.|||.:.|..:.
Mouse   317 ----------------------------------------GTFSPLTT----SDTSSPQKSLRTA 337

  Fly   471 PVAVPLPPIVTPA-SPTP--ASIESPDLYTP-EPTVAQVSAGGPSSQVAGNQIAVPQAAVAPAAT 531
            |.|.|||...:|| ||..  |.|.:.:||.| :||||:.:.||..:.:                 
Mouse   338 PAAGPLPGRSSPAGSPRTRHAQISTSNLYLPQDPTVAKGALGGEDTGI----------------- 385

  Fly   532 PNTRAANAKKKKMSDEEILEKLRTIVSVGDPNRKYTKMEKIGQGASGTVYTAIESSTGMEVAIKQ 596
                        ::.|:....||.:|..|||........|||:|::|.|..|.|..:|.:||:|.
Mouse   386 ------------VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKM 438

  Fly   597 MNLSQQPKKELIINEILVMRENKHPNVVNYLDSYLVSEELWVVMEYLPGGSLTDVVTETCMDEGQ 661
            |:|.:|.::||:.||:::||:.:|.|||....||||.|||||:||:|.||:|||::::..::|.|
Mouse   439 MDLRKQQRRELLFNEVVIMRDYQHLNVVEMYKSYLVGEELWVLMEFLQGGALTDIISQVRLNEEQ 503

  Fly   662 IAAVCREVLQALEFLHANQVIHRDIKSDNILLGLDGSVKLTDFGFCAQISPEQSKRTTMVGTPYW 726
            ||.||..|||||.:|||..|||||||||:|||.|||.|||:|||||||||.:..||.::||||||
Mouse   504 IATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYW 568

  Fly   727 MAPEVVTRKQYGPKVDLWSLGIMAIEMVEGEPPYLNENPLKALYLIATNGKPEIKEKDKLSSAFQ 791
            |||||::|..|..:||:||||||.||||:|||||.:::|::|:..:..:..|::|...|:|...:
Mouse   569 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSAPPKLKNSYKVSPVLR 633

  Fly   792 DFLDQCLEVEVDRRASALDLLKHPFLKLARPLASLTPLIMAAKEAT 837
            ||||:.|..|...||:|.:||.||||........|.|||...::.|
Mouse   634 DFLDRMLVREPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQT 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PakNP_001138013.2 PBD 83..137 CDD:279166 18/53 (34%)
STKc_PAK_I 558..818 CDD:270814 138/259 (53%)
S_TKc 566..817 CDD:214567 134/250 (54%)
Pak6NP_001028426.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 15/40 (38%)
PBD 11..63 CDD:334253 23/77 (30%)
Linker. /evidence=ECO:0000250 26..407 106/515 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..170 6/41 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..256 13/55 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..367 33/169 (20%)
STKc_PAK6 386..682 CDD:270821 148/294 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D757766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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